Protein–RNA interactions for Protein: O95749

GGPS1, Geranylgeranyl pyrophosphate synthase, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1O95749 KRT8P50-201ENST00000562022 1438 ntBASIC20.8■□□□□ 0.92
GGPS1O95749 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
GGPS1O95749 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
GGPS1O95749 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
GGPS1O95749 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
GGPS1O95749 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
GGPS1O95749 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
GGPS1O95749 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
GGPS1O95749 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
GGPS1O95749 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC20.8■□□□□ 0.92
GGPS1O95749 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC20.8■□□□□ 0.92
GGPS1O95749 AP003733.1-201ENST00000491725 852 ntBASIC20.8■□□□□ 0.92
GGPS1O95749 PP7080-204ENST00000510714 601 ntTSL 3 BASIC20.8■□□□□ 0.92
GGPS1O95749 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
GGPS1O95749 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC20.8■□□□□ 0.92
GGPS1O95749 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC20.8■□□□□ 0.92
GGPS1O95749 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
GGPS1O95749 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
GGPS1O95749 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
GGPS1O95749 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
GGPS1O95749 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
GGPS1O95749 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
GGPS1O95749 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
GGPS1O95749 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
GGPS1O95749 UBC-206ENST00000538617 1303 ntTSL 5 BASIC20.79■□□□□ 0.92
GGPS1O95749 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC20.79■□□□□ 0.92
GGPS1O95749 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
GGPS1O95749 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
GGPS1O95749 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
GGPS1O95749 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
GGPS1O95749 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
GGPS1O95749 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
GGPS1O95749 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC20.79■□□□□ 0.92
GGPS1O95749 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC20.79■□□□□ 0.92
GGPS1O95749 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
GGPS1O95749 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC20.79■□□□□ 0.92
GGPS1O95749 PRR29-207ENST00000580752 458 ntTSL 3 BASIC20.79■□□□□ 0.92
GGPS1O95749 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC20.79■□□□□ 0.92
GGPS1O95749 AC005332.3-201ENST00000589904 676 ntBASIC20.79■□□□□ 0.92
GGPS1O95749 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC20.79■□□□□ 0.92
GGPS1O95749 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC20.79■□□□□ 0.92
GGPS1O95749 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
GGPS1O95749 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
GGPS1O95749 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
GGPS1O95749 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
GGPS1O95749 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
GGPS1O95749 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
GGPS1O95749 KRT18P1-202ENST00000452408 1331 ntBASIC20.78■□□□□ 0.92
GGPS1O95749 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC20.78■□□□□ 0.92
GGPS1O95749 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
GGPS1O95749 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC20.78■□□□□ 0.92
GGPS1O95749 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
GGPS1O95749 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
GGPS1O95749 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
GGPS1O95749 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC20.78■□□□□ 0.92
GGPS1O95749 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
GGPS1O95749 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
GGPS1O95749 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
GGPS1O95749 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
GGPS1O95749 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
GGPS1O95749 PPIH-202ENST00000372549 327 ntTSL 3 BASIC20.78■□□□□ 0.92
GGPS1O95749 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC20.78■□□□□ 0.92
GGPS1O95749 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC20.78■□□□□ 0.92
GGPS1O95749 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC20.78■□□□□ 0.92
GGPS1O95749 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC20.78■□□□□ 0.92
GGPS1O95749 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
GGPS1O95749 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
GGPS1O95749 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC20.78■□□□□ 0.92
GGPS1O95749 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
GGPS1O95749 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC20.77■□□□□ 0.92
GGPS1O95749 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
GGPS1O95749 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC20.77■□□□□ 0.92
GGPS1O95749 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
GGPS1O95749 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC20.77■□□□□ 0.92
GGPS1O95749 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
GGPS1O95749 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
GGPS1O95749 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
GGPS1O95749 BAALC-202ENST00000306391 243 ntTSL 5 BASIC20.77■□□□□ 0.92
GGPS1O95749 BAALC-204ENST00000330955 222 ntTSL 5 BASIC20.77■□□□□ 0.92
GGPS1O95749 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
GGPS1O95749 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC20.77■□□□□ 0.92
GGPS1O95749 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
GGPS1O95749 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
GGPS1O95749 REEP1-209ENST00000541910 969 ntTSL 2 BASIC20.77■□□□□ 0.92
GGPS1O95749 PRELID1P1-202ENST00000567272 903 ntBASIC20.77■□□□□ 0.92
GGPS1O95749 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC20.77■□□□□ 0.92
GGPS1O95749 IL11-204ENST00000590625 1028 ntTSL 2 BASIC20.77■□□□□ 0.92
GGPS1O95749 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC20.77■□□□□ 0.92
GGPS1O95749 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
GGPS1O95749 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
GGPS1O95749 VPS72-207ENST00000640458 689 ntTSL 5 BASIC20.77■□□□□ 0.92
GGPS1O95749 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC20.77■□□□□ 0.92
GGPS1O95749 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
GGPS1O95749 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
GGPS1O95749 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
GGPS1O95749 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC20.77■□□□□ 0.92
GGPS1O95749 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
GGPS1O95749 AL020996.1-203ENST00000536896 2307 ntBASIC20.77■□□□□ 0.92
GGPS1O95749 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.91
GGPS1O95749 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms