Protein–RNA interactions for Protein: A6NDS4

TBC1D3B, TBC1 domain family member 3B, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3BA6NDS4 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
TBC1D3BA6NDS4 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TBC1D3BA6NDS4 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
TBC1D3BA6NDS4 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
TBC1D3BA6NDS4 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC18.84■□□□□ 0.61
TBC1D3BA6NDS4 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
TBC1D3BA6NDS4 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
TBC1D3BA6NDS4 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC18.83■□□□□ 0.61
TBC1D3BA6NDS4 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
TBC1D3BA6NDS4 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
TBC1D3BA6NDS4 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
TBC1D3BA6NDS4 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC18.83■□□□□ 0.61
TBC1D3BA6NDS4 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
TBC1D3BA6NDS4 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
TBC1D3BA6NDS4 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC18.83■□□□□ 0.61
TBC1D3BA6NDS4 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
TBC1D3BA6NDS4 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TBC1D3BA6NDS4 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC18.83■□□□□ 0.6
TBC1D3BA6NDS4 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC18.83■□□□□ 0.6
TBC1D3BA6NDS4 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
TBC1D3BA6NDS4 AL845331.1-201ENST00000424978 1190 ntBASIC18.83■□□□□ 0.6
TBC1D3BA6NDS4 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC18.83■□□□□ 0.6
TBC1D3BA6NDS4 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
TBC1D3BA6NDS4 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC18.83■□□□□ 0.6
TBC1D3BA6NDS4 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC18.83■□□□□ 0.6
TBC1D3BA6NDS4 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
TBC1D3BA6NDS4 AC024563.2-201ENST00000603282 481 ntBASIC18.83■□□□□ 0.6
TBC1D3BA6NDS4 AL390719.2-201ENST00000606993 987 ntBASIC18.83■□□□□ 0.6
TBC1D3BA6NDS4 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC18.83■□□□□ 0.6
TBC1D3BA6NDS4 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC18.83■□□□□ 0.6
TBC1D3BA6NDS4 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TBC1D3BA6NDS4 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TBC1D3BA6NDS4 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TBC1D3BA6NDS4 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
TBC1D3BA6NDS4 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
TBC1D3BA6NDS4 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
TBC1D3BA6NDS4 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TBC1D3BA6NDS4 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC18.82■□□□□ 0.6
TBC1D3BA6NDS4 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TBC1D3BA6NDS4 AC004870.1-201ENST00000315132 882 ntBASIC18.82■□□□□ 0.6
TBC1D3BA6NDS4 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC18.82■□□□□ 0.6
TBC1D3BA6NDS4 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC18.82■□□□□ 0.6
TBC1D3BA6NDS4 GPR32P1-201ENST00000601788 811 ntBASIC18.82■□□□□ 0.6
TBC1D3BA6NDS4 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
TBC1D3BA6NDS4 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC18.82■□□□□ 0.6
TBC1D3BA6NDS4 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC18.82■□□□□ 0.6
TBC1D3BA6NDS4 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TBC1D3BA6NDS4 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TBC1D3BA6NDS4 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC18.82■□□□□ 0.6
TBC1D3BA6NDS4 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TBC1D3BA6NDS4 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC18.82■□□□□ 0.6
TBC1D3BA6NDS4 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TBC1D3BA6NDS4 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC18.82■□□□□ 0.6
TBC1D3BA6NDS4 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC18.82■□□□□ 0.6
TBC1D3BA6NDS4 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TBC1D3BA6NDS4 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TBC1D3BA6NDS4 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
TBC1D3BA6NDS4 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TBC1D3BA6NDS4 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
TBC1D3BA6NDS4 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TBC1D3BA6NDS4 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TBC1D3BA6NDS4 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC18.81■□□□□ 0.6
TBC1D3BA6NDS4 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TBC1D3BA6NDS4 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
TBC1D3BA6NDS4 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC18.81■□□□□ 0.6
TBC1D3BA6NDS4 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TBC1D3BA6NDS4 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC18.81■□□□□ 0.6
TBC1D3BA6NDS4 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC18.81■□□□□ 0.6
TBC1D3BA6NDS4 UNC93B7-201ENST00000509439 705 ntBASIC18.81■□□□□ 0.6
TBC1D3BA6NDS4 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC18.81■□□□□ 0.6
TBC1D3BA6NDS4 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC18.81■□□□□ 0.6
TBC1D3BA6NDS4 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TBC1D3BA6NDS4 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC18.81■□□□□ 0.6
TBC1D3BA6NDS4 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC18.81■□□□□ 0.6
TBC1D3BA6NDS4 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TBC1D3BA6NDS4 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC18.81■□□□□ 0.6
TBC1D3BA6NDS4 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TBC1D3BA6NDS4 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TBC1D3BA6NDS4 ADM-207ENST00000530439 1839 ntTSL 2 BASIC18.81■□□□□ 0.6
TBC1D3BA6NDS4 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC18.81■□□□□ 0.6
TBC1D3BA6NDS4 SLC25A24-204ENST00000569674 2357 ntBASIC18.81■□□□□ 0.6
TBC1D3BA6NDS4 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TBC1D3BA6NDS4 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
TBC1D3BA6NDS4 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
TBC1D3BA6NDS4 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC18.81■□□□□ 0.6
TBC1D3BA6NDS4 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TBC1D3BA6NDS4 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TBC1D3BA6NDS4 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TBC1D3BA6NDS4 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TBC1D3BA6NDS4 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
TBC1D3BA6NDS4 AC120498.9-201ENST00000339021 3867 ntBASIC18.8■□□□□ 0.6
TBC1D3BA6NDS4 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
TBC1D3BA6NDS4 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TBC1D3BA6NDS4 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
TBC1D3BA6NDS4 IGHGP-201ENST00000390555 1178 ntBASIC18.8■□□□□ 0.6
TBC1D3BA6NDS4 AC012615.1-201ENST00000565797 1299 ntBASIC18.8■□□□□ 0.6
TBC1D3BA6NDS4 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC18.8■□□□□ 0.6
TBC1D3BA6NDS4 LINC01711-201ENST00000598340 967 ntBASIC18.8■□□□□ 0.6
TBC1D3BA6NDS4 AL121772.3-201ENST00000610840 674 ntBASIC18.8■□□□□ 0.6
TBC1D3BA6NDS4 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC18.8■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms