Protein–RNA interactions for Protein: Q9C0A0

CNTNAP4, Contactin-associated protein-like 4, humanhuman

Predictions only

Length 1,308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP4Q9C0A0 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC23.35■■□□□ 1.33
CNTNAP4Q9C0A0 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
CNTNAP4Q9C0A0 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
CNTNAP4Q9C0A0 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC23.35■■□□□ 1.33
CNTNAP4Q9C0A0 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC23.35■■□□□ 1.33
CNTNAP4Q9C0A0 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC23.35■■□□□ 1.33
CNTNAP4Q9C0A0 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
CNTNAP4Q9C0A0 GZMM-202ENST00000592501 941 ntTSL 3 BASIC23.35■■□□□ 1.33
CNTNAP4Q9C0A0 AP001269.4-201ENST00000609611 512 ntBASIC23.35■■□□□ 1.33
CNTNAP4Q9C0A0 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC23.35■■□□□ 1.33
CNTNAP4Q9C0A0 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
CNTNAP4Q9C0A0 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC23.35■■□□□ 1.33
CNTNAP4Q9C0A0 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC23.35■■□□□ 1.33
CNTNAP4Q9C0A0 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC23.35■■□□□ 1.33
CNTNAP4Q9C0A0 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC23.35■■□□□ 1.33
CNTNAP4Q9C0A0 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
CNTNAP4Q9C0A0 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
CNTNAP4Q9C0A0 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC23.35■■□□□ 1.33
CNTNAP4Q9C0A0 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
CNTNAP4Q9C0A0 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
CNTNAP4Q9C0A0 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
CNTNAP4Q9C0A0 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC23.34■■□□□ 1.33
CNTNAP4Q9C0A0 MIR149-201ENST00000384879 89 ntBASIC23.34■■□□□ 1.33
CNTNAP4Q9C0A0 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC23.34■■□□□ 1.33
CNTNAP4Q9C0A0 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC23.34■■□□□ 1.33
CNTNAP4Q9C0A0 AC008687.5-201ENST00000593746 558 ntBASIC23.34■■□□□ 1.33
CNTNAP4Q9C0A0 TERC-201ENST00000602385 541 ntBASIC23.34■■□□□ 1.33
CNTNAP4Q9C0A0 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC23.34■■□□□ 1.33
CNTNAP4Q9C0A0 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC23.34■■□□□ 1.33
CNTNAP4Q9C0A0 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC23.34■■□□□ 1.33
CNTNAP4Q9C0A0 PAN3-AS1-201ENST00000563843 1351 ntBASIC23.34■■□□□ 1.33
CNTNAP4Q9C0A0 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
CNTNAP4Q9C0A0 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC23.34■■□□□ 1.33
CNTNAP4Q9C0A0 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
CNTNAP4Q9C0A0 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC23.34■■□□□ 1.33
CNTNAP4Q9C0A0 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
CNTNAP4Q9C0A0 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
CNTNAP4Q9C0A0 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC23.34■■□□□ 1.33
CNTNAP4Q9C0A0 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
CNTNAP4Q9C0A0 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
CNTNAP4Q9C0A0 MED16-201ENST00000269814 1199 ntTSL 5 BASIC23.33■■□□□ 1.33
CNTNAP4Q9C0A0 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
CNTNAP4Q9C0A0 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC23.33■■□□□ 1.33
CNTNAP4Q9C0A0 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC23.33■■□□□ 1.33
CNTNAP4Q9C0A0 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC23.33■■□□□ 1.33
CNTNAP4Q9C0A0 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
CNTNAP4Q9C0A0 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC23.33■■□□□ 1.33
CNTNAP4Q9C0A0 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
CNTNAP4Q9C0A0 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC23.33■■□□□ 1.33
CNTNAP4Q9C0A0 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC23.33■■□□□ 1.33
CNTNAP4Q9C0A0 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC23.33■■□□□ 1.33
CNTNAP4Q9C0A0 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
CNTNAP4Q9C0A0 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
CNTNAP4Q9C0A0 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC23.33■■□□□ 1.33
CNTNAP4Q9C0A0 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC23.33■■□□□ 1.33
CNTNAP4Q9C0A0 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC23.33■■□□□ 1.32
CNTNAP4Q9C0A0 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC23.33■■□□□ 1.32
CNTNAP4Q9C0A0 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
CNTNAP4Q9C0A0 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
CNTNAP4Q9C0A0 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC23.33■■□□□ 1.32
CNTNAP4Q9C0A0 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC23.33■■□□□ 1.32
CNTNAP4Q9C0A0 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
CNTNAP4Q9C0A0 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
CNTNAP4Q9C0A0 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
CNTNAP4Q9C0A0 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
CNTNAP4Q9C0A0 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC23.33■■□□□ 1.32
CNTNAP4Q9C0A0 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC23.33■■□□□ 1.32
CNTNAP4Q9C0A0 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC23.33■■□□□ 1.32
CNTNAP4Q9C0A0 MTDHP3-201ENST00000594186 672 ntBASIC23.33■■□□□ 1.32
CNTNAP4Q9C0A0 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC23.33■■□□□ 1.32
CNTNAP4Q9C0A0 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC23.33■■□□□ 1.32
CNTNAP4Q9C0A0 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
CNTNAP4Q9C0A0 ZNF259P1-201ENST00000407656 1365 ntBASIC23.32■■□□□ 1.32
CNTNAP4Q9C0A0 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
CNTNAP4Q9C0A0 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC23.32■■□□□ 1.32
CNTNAP4Q9C0A0 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
CNTNAP4Q9C0A0 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC23.32■■□□□ 1.32
CNTNAP4Q9C0A0 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC23.32■■□□□ 1.32
CNTNAP4Q9C0A0 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
CNTNAP4Q9C0A0 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC23.32■■□□□ 1.32
CNTNAP4Q9C0A0 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC23.32■■□□□ 1.32
CNTNAP4Q9C0A0 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
CNTNAP4Q9C0A0 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
CNTNAP4Q9C0A0 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
CNTNAP4Q9C0A0 MEG3-211ENST00000452514 461 ntTSL 3 BASIC23.32■■□□□ 1.32
CNTNAP4Q9C0A0 AC068472.1-201ENST00000474589 881 ntBASIC23.32■■□□□ 1.32
CNTNAP4Q9C0A0 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC23.32■■□□□ 1.32
CNTNAP4Q9C0A0 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC23.32■■□□□ 1.32
CNTNAP4Q9C0A0 AC145285.3-201ENST00000564603 959 ntBASIC23.32■■□□□ 1.32
CNTNAP4Q9C0A0 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC23.32■■□□□ 1.32
CNTNAP4Q9C0A0 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC23.32■■□□□ 1.32
CNTNAP4Q9C0A0 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
CNTNAP4Q9C0A0 AC116407.3-201ENST00000623905 1129 ntBASIC23.32■■□□□ 1.32
CNTNAP4Q9C0A0 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
CNTNAP4Q9C0A0 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC23.32■■□□□ 1.32
CNTNAP4Q9C0A0 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
CNTNAP4Q9C0A0 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC23.31■■□□□ 1.32
CNTNAP4Q9C0A0 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
CNTNAP4Q9C0A0 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC23.31■■□□□ 1.32
CNTNAP4Q9C0A0 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC23.31■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms