Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC18.75■□□□□ 0.59
PHOX2BQ99453 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC18.75■□□□□ 0.59
PHOX2BQ99453 DNAJB3-201ENST00000446806 729 ntBASIC18.75■□□□□ 0.59
PHOX2BQ99453 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC18.75■□□□□ 0.59
PHOX2BQ99453 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC18.75■□□□□ 0.59
PHOX2BQ99453 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC18.75■□□□□ 0.59
PHOX2BQ99453 LITAF-220ENST00000620789 692 ntTSL 5 BASIC18.75■□□□□ 0.59
PHOX2BQ99453 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC18.75■□□□□ 0.59
PHOX2BQ99453 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PHOX2BQ99453 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC18.75■□□□□ 0.59
PHOX2BQ99453 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PHOX2BQ99453 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
PHOX2BQ99453 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC18.75■□□□□ 0.59
PHOX2BQ99453 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC18.75■□□□□ 0.59
PHOX2BQ99453 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC18.75■□□□□ 0.59
PHOX2BQ99453 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
PHOX2BQ99453 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PHOX2BQ99453 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PHOX2BQ99453 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
PHOX2BQ99453 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PHOX2BQ99453 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PHOX2BQ99453 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PHOX2BQ99453 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
PHOX2BQ99453 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PHOX2BQ99453 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PHOX2BQ99453 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC18.74■□□□□ 0.59
PHOX2BQ99453 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PHOX2BQ99453 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
PHOX2BQ99453 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PHOX2BQ99453 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PHOX2BQ99453 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PHOX2BQ99453 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PHOX2BQ99453 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PHOX2BQ99453 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC18.74■□□□□ 0.59
PHOX2BQ99453 DDT-203ENST00000403754 569 ntTSL 3 BASIC18.74■□□□□ 0.59
PHOX2BQ99453 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PHOX2BQ99453 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC18.74■□□□□ 0.59
PHOX2BQ99453 PNKD-204ENST00000436005 978 ntTSL 5 BASIC18.74■□□□□ 0.59
PHOX2BQ99453 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
PHOX2BQ99453 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC18.74■□□□□ 0.59
PHOX2BQ99453 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PHOX2BQ99453 IRF8-202ENST00000562492 946 ntTSL 3 BASIC18.74■□□□□ 0.59
PHOX2BQ99453 AC034105.1-201ENST00000563488 319 ntBASIC18.74■□□□□ 0.59
PHOX2BQ99453 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC18.74■□□□□ 0.59
PHOX2BQ99453 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC18.74■□□□□ 0.59
PHOX2BQ99453 AC008608.2-201ENST00000606089 416 ntBASIC18.74■□□□□ 0.59
PHOX2BQ99453 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
PHOX2BQ99453 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC18.74■□□□□ 0.59
PHOX2BQ99453 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PHOX2BQ99453 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC18.74■□□□□ 0.59
PHOX2BQ99453 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
PHOX2BQ99453 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PHOX2BQ99453 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PHOX2BQ99453 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PHOX2BQ99453 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PHOX2BQ99453 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PHOX2BQ99453 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
PHOX2BQ99453 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PHOX2BQ99453 DPP3P2-201ENST00000416030 1696 ntBASIC18.73■□□□□ 0.59
PHOX2BQ99453 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PHOX2BQ99453 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
PHOX2BQ99453 AC036111.1-201ENST00000533973 1582 ntBASIC18.73■□□□□ 0.59
PHOX2BQ99453 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PHOX2BQ99453 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC18.73■□□□□ 0.59
PHOX2BQ99453 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC18.73■□□□□ 0.59
PHOX2BQ99453 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC18.73■□□□□ 0.59
PHOX2BQ99453 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC18.73■□□□□ 0.59
PHOX2BQ99453 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
PHOX2BQ99453 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC18.73■□□□□ 0.59
PHOX2BQ99453 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PHOX2BQ99453 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PHOX2BQ99453 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
PHOX2BQ99453 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC18.73■□□□□ 0.59
PHOX2BQ99453 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PHOX2BQ99453 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PHOX2BQ99453 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC18.73■□□□□ 0.59
PHOX2BQ99453 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
PHOX2BQ99453 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC18.73■□□□□ 0.59
PHOX2BQ99453 IGHV3-22-201ENST00000520721 359 ntBASIC18.73■□□□□ 0.59
PHOX2BQ99453 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC18.73■□□□□ 0.59
PHOX2BQ99453 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC18.73■□□□□ 0.59
PHOX2BQ99453 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC18.73■□□□□ 0.59
PHOX2BQ99453 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC18.73■□□□□ 0.59
PHOX2BQ99453 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PHOX2BQ99453 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PHOX2BQ99453 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PHOX2BQ99453 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC18.73■□□□□ 0.59
PHOX2BQ99453 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PHOX2BQ99453 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PHOX2BQ99453 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PHOX2BQ99453 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC18.73■□□□□ 0.59
PHOX2BQ99453 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
PHOX2BQ99453 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PHOX2BQ99453 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC18.73■□□□□ 0.59
PHOX2BQ99453 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
PHOX2BQ99453 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PHOX2BQ99453 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PHOX2BQ99453 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
PHOX2BQ99453 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC18.72■□□□□ 0.59
PHOX2BQ99453 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms