Protein–RNA interactions for Protein: Q96M96

FGD4, FYVE, RhoGEF and PH domain-containing protein 4, humanhuman

Predictions only

Length 766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FGD4Q96M96 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
FGD4Q96M96 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
FGD4Q96M96 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
FGD4Q96M96 RN7SL606P-201ENST00000472779 293 ntBASIC21.02■□□□□ 0.96
FGD4Q96M96 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC21.02■□□□□ 0.96
FGD4Q96M96 KRT18P31-201ENST00000506277 1292 ntBASIC21.02■□□□□ 0.96
FGD4Q96M96 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC21.02■□□□□ 0.96
FGD4Q96M96 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
FGD4Q96M96 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
FGD4Q96M96 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC21.02■□□□□ 0.95
FGD4Q96M96 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
FGD4Q96M96 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
FGD4Q96M96 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.95
FGD4Q96M96 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC21.02■□□□□ 0.95
FGD4Q96M96 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
FGD4Q96M96 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
FGD4Q96M96 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
FGD4Q96M96 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC21.01■□□□□ 0.95
FGD4Q96M96 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
FGD4Q96M96 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
FGD4Q96M96 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC21.01■□□□□ 0.95
FGD4Q96M96 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC21.01■□□□□ 0.95
FGD4Q96M96 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC21.01■□□□□ 0.95
FGD4Q96M96 REEP1-209ENST00000541910 969 ntTSL 2 BASIC21.01■□□□□ 0.95
FGD4Q96M96 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC21.01■□□□□ 0.95
FGD4Q96M96 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC21.01■□□□□ 0.95
FGD4Q96M96 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC21.01■□□□□ 0.95
FGD4Q96M96 AP005901.3-202ENST00000581653 237 ntBASIC21.01■□□□□ 0.95
FGD4Q96M96 AC090616.6-201ENST00000582640 721 ntBASIC21.01■□□□□ 0.95
FGD4Q96M96 AFG3L1P-217ENST00000557444 2447 ntBASIC21.01■□□□□ 0.95
FGD4Q96M96 AL032819.2-201ENST00000624543 2162 ntBASIC21.01■□□□□ 0.95
FGD4Q96M96 NFYC-AS1-201ENST00000606277 1687 ntBASIC21.01■□□□□ 0.95
FGD4Q96M96 AL357033.4-201ENST00000617703 1807 ntBASIC21.01■□□□□ 0.95
FGD4Q96M96 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
FGD4Q96M96 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC21.01■□□□□ 0.95
FGD4Q96M96 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
FGD4Q96M96 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
FGD4Q96M96 HEIH-201ENST00000623091 1652 ntBASIC21■□□□□ 0.95
FGD4Q96M96 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
FGD4Q96M96 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC21■□□□□ 0.95
FGD4Q96M96 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC21■□□□□ 0.95
FGD4Q96M96 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
FGD4Q96M96 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
FGD4Q96M96 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
FGD4Q96M96 AC091607.1-201ENST00000490318 1060 ntBASIC21■□□□□ 0.95
FGD4Q96M96 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC21■□□□□ 0.95
FGD4Q96M96 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC21■□□□□ 0.95
FGD4Q96M96 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC21■□□□□ 0.95
FGD4Q96M96 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
FGD4Q96M96 AL592071.1-201ENST00000611956 408 ntBASIC21■□□□□ 0.95
FGD4Q96M96 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
FGD4Q96M96 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC21■□□□□ 0.95
FGD4Q96M96 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC21■□□□□ 0.95
FGD4Q96M96 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
FGD4Q96M96 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
FGD4Q96M96 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC21■□□□□ 0.95
FGD4Q96M96 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
FGD4Q96M96 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
FGD4Q96M96 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC21■□□□□ 0.95
FGD4Q96M96 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC21■□□□□ 0.95
FGD4Q96M96 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
FGD4Q96M96 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC21■□□□□ 0.95
FGD4Q96M96 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
FGD4Q96M96 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
FGD4Q96M96 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
FGD4Q96M96 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
FGD4Q96M96 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC20.99■□□□□ 0.95
FGD4Q96M96 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
FGD4Q96M96 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
FGD4Q96M96 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
FGD4Q96M96 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
FGD4Q96M96 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
FGD4Q96M96 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
FGD4Q96M96 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
FGD4Q96M96 LINC00167-201ENST00000530583 1419 ntBASIC20.99■□□□□ 0.95
FGD4Q96M96 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
FGD4Q96M96 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC20.99■□□□□ 0.95
FGD4Q96M96 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC20.99■□□□□ 0.95
FGD4Q96M96 IGHV3-47-201ENST00000425060 335 ntBASIC20.99■□□□□ 0.95
FGD4Q96M96 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC20.99■□□□□ 0.95
FGD4Q96M96 AC024563.2-201ENST00000603282 481 ntBASIC20.99■□□□□ 0.95
FGD4Q96M96 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC20.99■□□□□ 0.95
FGD4Q96M96 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
FGD4Q96M96 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
FGD4Q96M96 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
FGD4Q96M96 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC20.99■□□□□ 0.95
FGD4Q96M96 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
FGD4Q96M96 AC093484.2-201ENST00000580996 2166 ntBASIC20.99■□□□□ 0.95
FGD4Q96M96 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
FGD4Q96M96 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC20.98■□□□□ 0.95
FGD4Q96M96 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC20.98■□□□□ 0.95
FGD4Q96M96 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
FGD4Q96M96 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC20.98■□□□□ 0.95
FGD4Q96M96 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC20.98■□□□□ 0.95
FGD4Q96M96 BET1L-206ENST00000486280 665 ntTSL 3 BASIC20.98■□□□□ 0.95
FGD4Q96M96 AC091304.2-201ENST00000564639 760 ntBASIC20.98■□□□□ 0.95
FGD4Q96M96 AL121772.3-201ENST00000610840 674 ntBASIC20.98■□□□□ 0.95
FGD4Q96M96 IGHV3-41-201ENST00000613121 348 ntBASIC20.98■□□□□ 0.95
FGD4Q96M96 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
FGD4Q96M96 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms