Protein–RNA interactions for Protein: Q7LBR1

CHMP1B, Charged multivesicular body protein 1b, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1BQ7LBR1 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
CHMP1BQ7LBR1 AC005332.7-201ENST00000614046 2005 ntBASIC17.14■□□□□ 0.34
CHMP1BQ7LBR1 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.34
CHMP1BQ7LBR1 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
CHMP1BQ7LBR1 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CHMP1BQ7LBR1 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CHMP1BQ7LBR1 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CHMP1BQ7LBR1 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CHMP1BQ7LBR1 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CHMP1BQ7LBR1 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC17.14■□□□□ 0.33
CHMP1BQ7LBR1 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CHMP1BQ7LBR1 FAM210CP-201ENST00000445714 574 ntBASIC17.14■□□□□ 0.33
CHMP1BQ7LBR1 TSPY17P-201ENST00000450329 467 ntBASIC17.14■□□□□ 0.33
CHMP1BQ7LBR1 PPOX-219ENST00000544598 813 ntTSL 2 BASIC17.14■□□□□ 0.33
CHMP1BQ7LBR1 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC17.14■□□□□ 0.33
CHMP1BQ7LBR1 GPX4-207ENST00000589115 812 ntTSL 2 BASIC17.14■□□□□ 0.33
CHMP1BQ7LBR1 AC012306.2-201ENST00000609350 630 ntBASIC17.14■□□□□ 0.33
CHMP1BQ7LBR1 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC17.14■□□□□ 0.33
CHMP1BQ7LBR1 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC17.14■□□□□ 0.33
CHMP1BQ7LBR1 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC17.14■□□□□ 0.33
CHMP1BQ7LBR1 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
CHMP1BQ7LBR1 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CHMP1BQ7LBR1 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CHMP1BQ7LBR1 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CHMP1BQ7LBR1 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CHMP1BQ7LBR1 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CHMP1BQ7LBR1 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CHMP1BQ7LBR1 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CHMP1BQ7LBR1 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC17.13■□□□□ 0.33
CHMP1BQ7LBR1 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CHMP1BQ7LBR1 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CHMP1BQ7LBR1 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC17.13■□□□□ 0.33
CHMP1BQ7LBR1 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC17.13■□□□□ 0.33
CHMP1BQ7LBR1 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CHMP1BQ7LBR1 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
CHMP1BQ7LBR1 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CHMP1BQ7LBR1 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CHMP1BQ7LBR1 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
CHMP1BQ7LBR1 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
CHMP1BQ7LBR1 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
CHMP1BQ7LBR1 CA15P1-201ENST00000481698 905 ntBASIC17.13■□□□□ 0.33
CHMP1BQ7LBR1 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC17.13■□□□□ 0.33
CHMP1BQ7LBR1 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC17.13■□□□□ 0.33
CHMP1BQ7LBR1 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CHMP1BQ7LBR1 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
CHMP1BQ7LBR1 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
CHMP1BQ7LBR1 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CHMP1BQ7LBR1 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CHMP1BQ7LBR1 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC17.13■□□□□ 0.33
CHMP1BQ7LBR1 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC17.13■□□□□ 0.33
CHMP1BQ7LBR1 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CHMP1BQ7LBR1 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CHMP1BQ7LBR1 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC17.13■□□□□ 0.33
CHMP1BQ7LBR1 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CHMP1BQ7LBR1 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC17.13■□□□□ 0.33
CHMP1BQ7LBR1 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC17.13■□□□□ 0.33
CHMP1BQ7LBR1 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CHMP1BQ7LBR1 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CHMP1BQ7LBR1 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CHMP1BQ7LBR1 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CHMP1BQ7LBR1 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CHMP1BQ7LBR1 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC17.12■□□□□ 0.33
CHMP1BQ7LBR1 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CHMP1BQ7LBR1 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CHMP1BQ7LBR1 Z82202.1-201ENST00000623446 1880 ntBASIC17.12■□□□□ 0.33
CHMP1BQ7LBR1 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
CHMP1BQ7LBR1 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC17.12■□□□□ 0.33
CHMP1BQ7LBR1 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CHMP1BQ7LBR1 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CHMP1BQ7LBR1 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC17.12■□□□□ 0.33
CHMP1BQ7LBR1 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC17.12■□□□□ 0.33
CHMP1BQ7LBR1 ECEL1P2-202ENST00000465689 757 ntBASIC17.12■□□□□ 0.33
CHMP1BQ7LBR1 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC17.12■□□□□ 0.33
CHMP1BQ7LBR1 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
CHMP1BQ7LBR1 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
CHMP1BQ7LBR1 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC17.12■□□□□ 0.33
CHMP1BQ7LBR1 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CHMP1BQ7LBR1 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CHMP1BQ7LBR1 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CHMP1BQ7LBR1 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CHMP1BQ7LBR1 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC17.12■□□□□ 0.33
CHMP1BQ7LBR1 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC17.12■□□□□ 0.33
CHMP1BQ7LBR1 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
CHMP1BQ7LBR1 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
CHMP1BQ7LBR1 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CHMP1BQ7LBR1 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC17.12■□□□□ 0.33
CHMP1BQ7LBR1 KRT8P11-201ENST00000409686 1436 ntBASIC17.12■□□□□ 0.33
CHMP1BQ7LBR1 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC17.12■□□□□ 0.33
CHMP1BQ7LBR1 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
CHMP1BQ7LBR1 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CHMP1BQ7LBR1 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CHMP1BQ7LBR1 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC17.11■□□□□ 0.33
CHMP1BQ7LBR1 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
CHMP1BQ7LBR1 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CHMP1BQ7LBR1 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC17.11■□□□□ 0.33
CHMP1BQ7LBR1 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
CHMP1BQ7LBR1 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CHMP1BQ7LBR1 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC17.11■□□□□ 0.33
CHMP1BQ7LBR1 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CHMP1BQ7LBR1 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms