Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LYSMD4Q5XG99 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
LYSMD4Q5XG99 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC18.19■□□□□ 0.5
LYSMD4Q5XG99 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
LYSMD4Q5XG99 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
LYSMD4Q5XG99 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
LYSMD4Q5XG99 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
LYSMD4Q5XG99 HES2-202ENST00000377836 507 ntTSL 2 BASIC18.19■□□□□ 0.5
LYSMD4Q5XG99 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC18.19■□□□□ 0.5
LYSMD4Q5XG99 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
LYSMD4Q5XG99 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC18.19■□□□□ 0.5
LYSMD4Q5XG99 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC18.19■□□□□ 0.5
LYSMD4Q5XG99 THAP5-204ENST00000438865 868 ntTSL 2 BASIC18.19■□□□□ 0.5
LYSMD4Q5XG99 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC18.19■□□□□ 0.5
LYSMD4Q5XG99 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC18.19■□□□□ 0.5
LYSMD4Q5XG99 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC18.19■□□□□ 0.5
LYSMD4Q5XG99 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
LYSMD4Q5XG99 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
LYSMD4Q5XG99 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC18.19■□□□□ 0.5
LYSMD4Q5XG99 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LYSMD4Q5XG99 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
LYSMD4Q5XG99 AC008608.2-201ENST00000606089 416 ntBASIC18.19■□□□□ 0.5
LYSMD4Q5XG99 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
LYSMD4Q5XG99 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LYSMD4Q5XG99 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
LYSMD4Q5XG99 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC18.19■□□□□ 0.5
LYSMD4Q5XG99 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
LYSMD4Q5XG99 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LYSMD4Q5XG99 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC18.18■□□□□ 0.5
LYSMD4Q5XG99 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LYSMD4Q5XG99 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
LYSMD4Q5XG99 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
LYSMD4Q5XG99 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC18.18■□□□□ 0.5
LYSMD4Q5XG99 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LYSMD4Q5XG99 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC18.18■□□□□ 0.5
LYSMD4Q5XG99 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC18.18■□□□□ 0.5
LYSMD4Q5XG99 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
LYSMD4Q5XG99 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LYSMD4Q5XG99 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LYSMD4Q5XG99 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
LYSMD4Q5XG99 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
LYSMD4Q5XG99 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC18.18■□□□□ 0.5
LYSMD4Q5XG99 RNPS1P1-201ENST00000507437 918 ntBASIC18.18■□□□□ 0.5
LYSMD4Q5XG99 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
LYSMD4Q5XG99 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC18.18■□□□□ 0.5
LYSMD4Q5XG99 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC18.18■□□□□ 0.5
LYSMD4Q5XG99 AC092865.5-201ENST00000545435 363 ntBASIC18.18■□□□□ 0.5
LYSMD4Q5XG99 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
LYSMD4Q5XG99 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LYSMD4Q5XG99 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC18.18■□□□□ 0.5
LYSMD4Q5XG99 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LYSMD4Q5XG99 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LYSMD4Q5XG99 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC18.18■□□□□ 0.5
LYSMD4Q5XG99 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
LYSMD4Q5XG99 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
LYSMD4Q5XG99 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC18.18■□□□□ 0.5
LYSMD4Q5XG99 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LYSMD4Q5XG99 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
LYSMD4Q5XG99 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC18.17■□□□□ 0.5
LYSMD4Q5XG99 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC18.17■□□□□ 0.5
LYSMD4Q5XG99 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LYSMD4Q5XG99 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LYSMD4Q5XG99 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
LYSMD4Q5XG99 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC18.17■□□□□ 0.5
LYSMD4Q5XG99 KRT8P50-201ENST00000562022 1438 ntBASIC18.17■□□□□ 0.5
LYSMD4Q5XG99 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC18.17■□□□□ 0.5
LYSMD4Q5XG99 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC18.17■□□□□ 0.5
LYSMD4Q5XG99 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC18.17■□□□□ 0.5
LYSMD4Q5XG99 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LYSMD4Q5XG99 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LYSMD4Q5XG99 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
LYSMD4Q5XG99 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC18.17■□□□□ 0.5
LYSMD4Q5XG99 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
LYSMD4Q5XG99 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC18.17■□□□□ 0.5
LYSMD4Q5XG99 AC148477.8-201ENST00000624298 468 ntBASIC18.17■□□□□ 0.5
LYSMD4Q5XG99 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC18.17■□□□□ 0.5
LYSMD4Q5XG99 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC18.17■□□□□ 0.5
LYSMD4Q5XG99 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC18.17■□□□□ 0.5
LYSMD4Q5XG99 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LYSMD4Q5XG99 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LYSMD4Q5XG99 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC18.17■□□□□ 0.5
LYSMD4Q5XG99 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
LYSMD4Q5XG99 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
LYSMD4Q5XG99 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LYSMD4Q5XG99 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC18.17■□□□□ 0.5
LYSMD4Q5XG99 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC18.16■□□□□ 0.5
LYSMD4Q5XG99 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
LYSMD4Q5XG99 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
LYSMD4Q5XG99 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
LYSMD4Q5XG99 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC18.16■□□□□ 0.5
LYSMD4Q5XG99 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
LYSMD4Q5XG99 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
LYSMD4Q5XG99 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
LYSMD4Q5XG99 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
LYSMD4Q5XG99 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
LYSMD4Q5XG99 MIR1233-2-201ENST00000408138 82 ntBASIC18.16■□□□□ 0.5
LYSMD4Q5XG99 MIR1233-1-201ENST00000408722 82 ntBASIC18.16■□□□□ 0.5
LYSMD4Q5XG99 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC18.16■□□□□ 0.5
LYSMD4Q5XG99 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
LYSMD4Q5XG99 AC132008.2-207ENST00000454517 770 ntBASIC18.16■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms