Protein–RNA interactions for Protein: P35249

RFC4, Replication factor C subunit 4, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4P35249 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC23.3■■□□□ 1.32
RFC4P35249 Z98044.1-201ENST00000632503 1764 ntBASIC23.3■■□□□ 1.32
RFC4P35249 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
RFC4P35249 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
RFC4P35249 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
RFC4P35249 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
RFC4P35249 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
RFC4P35249 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC23.3■■□□□ 1.32
RFC4P35249 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC23.3■■□□□ 1.32
RFC4P35249 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
RFC4P35249 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
RFC4P35249 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
RFC4P35249 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC23.3■■□□□ 1.32
RFC4P35249 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
RFC4P35249 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC23.29■■□□□ 1.32
RFC4P35249 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC23.29■■□□□ 1.32
RFC4P35249 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC23.29■■□□□ 1.32
RFC4P35249 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
RFC4P35249 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
RFC4P35249 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
RFC4P35249 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC23.29■■□□□ 1.32
RFC4P35249 RCN1P2-201ENST00000398357 915 ntBASIC23.29■■□□□ 1.32
RFC4P35249 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
RFC4P35249 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC23.29■■□□□ 1.32
RFC4P35249 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC23.29■■□□□ 1.32
RFC4P35249 KRT8P50-201ENST00000562022 1438 ntBASIC23.29■■□□□ 1.32
RFC4P35249 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC23.29■■□□□ 1.32
RFC4P35249 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
RFC4P35249 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC23.29■■□□□ 1.32
RFC4P35249 FAM215A-202ENST00000632077 792 ntBASIC23.29■■□□□ 1.32
RFC4P35249 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC23.29■■□□□ 1.32
RFC4P35249 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
RFC4P35249 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
RFC4P35249 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC23.29■■□□□ 1.32
RFC4P35249 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
RFC4P35249 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
RFC4P35249 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC23.29■■□□□ 1.32
RFC4P35249 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
RFC4P35249 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
RFC4P35249 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
RFC4P35249 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC23.29■■□□□ 1.32
RFC4P35249 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
RFC4P35249 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC23.28■■□□□ 1.32
RFC4P35249 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
RFC4P35249 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
RFC4P35249 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC23.28■■□□□ 1.32
RFC4P35249 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
RFC4P35249 LINC01521-201ENST00000504184 1943 ntBASIC23.28■■□□□ 1.32
RFC4P35249 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
RFC4P35249 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC23.28■■□□□ 1.32
RFC4P35249 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
RFC4P35249 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
RFC4P35249 DDT-203ENST00000403754 569 ntTSL 3 BASIC23.28■■□□□ 1.32
RFC4P35249 DDT-206ENST00000430101 573 ntTSL 2 BASIC23.28■■□□□ 1.32
RFC4P35249 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
RFC4P35249 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC23.28■■□□□ 1.32
RFC4P35249 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC23.28■■□□□ 1.32
RFC4P35249 COX5A-204ENST00000567270 579 ntTSL 3 BASIC23.28■■□□□ 1.32
RFC4P35249 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC23.28■■□□□ 1.32
RFC4P35249 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
RFC4P35249 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC23.28■■□□□ 1.32
RFC4P35249 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC23.28■■□□□ 1.32
RFC4P35249 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC23.28■■□□□ 1.32
RFC4P35249 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
RFC4P35249 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC23.28■■□□□ 1.32
RFC4P35249 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC23.28■■□□□ 1.32
RFC4P35249 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC23.27■■□□□ 1.32
RFC4P35249 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC23.27■■□□□ 1.32
RFC4P35249 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC23.27■■□□□ 1.32
RFC4P35249 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.32
RFC4P35249 FP475955.4-201ENST00000623131 1990 ntBASIC23.27■■□□□ 1.32
RFC4P35249 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
RFC4P35249 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
RFC4P35249 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC23.27■■□□□ 1.32
RFC4P35249 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC23.27■■□□□ 1.32
RFC4P35249 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC23.27■■□□□ 1.32
RFC4P35249 FGFR3P6-201ENST00000457012 610 ntBASIC23.27■■□□□ 1.32
RFC4P35249 SCARNA2-201ENST00000458748 420 ntBASIC23.27■■□□□ 1.32
RFC4P35249 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC23.27■■□□□ 1.32
RFC4P35249 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC23.27■■□□□ 1.32
RFC4P35249 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC23.27■■□□□ 1.32
RFC4P35249 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
RFC4P35249 AC116407.3-201ENST00000623905 1129 ntBASIC23.27■■□□□ 1.32
RFC4P35249 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC23.27■■□□□ 1.32
RFC4P35249 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC23.27■■□□□ 1.32
RFC4P35249 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC23.27■■□□□ 1.32
RFC4P35249 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC23.27■■□□□ 1.32
RFC4P35249 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
RFC4P35249 AL357033.4-201ENST00000617703 1807 ntBASIC23.26■■□□□ 1.31
RFC4P35249 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
RFC4P35249 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
RFC4P35249 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
RFC4P35249 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC23.26■■□□□ 1.31
RFC4P35249 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
RFC4P35249 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC23.26■■□□□ 1.31
RFC4P35249 CCS-201ENST00000310190 942 ntTSL 5 BASIC23.26■■□□□ 1.31
RFC4P35249 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC23.26■■□□□ 1.31
RFC4P35249 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
RFC4P35249 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC23.26■■□□□ 1.31
RFC4P35249 HNRNPDP1-201ENST00000439535 754 ntBASIC23.26■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 12 ms