Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 NOC2LP1-202ENST00000452600 2235 ntBASIC18.53■□□□□ 0.56
XRCC1P18887 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
XRCC1P18887 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC18.53■□□□□ 0.56
XRCC1P18887 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
XRCC1P18887 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
XRCC1P18887 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
XRCC1P18887 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
XRCC1P18887 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
XRCC1P18887 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC18.53■□□□□ 0.56
XRCC1P18887 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
XRCC1P18887 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC18.53■□□□□ 0.56
XRCC1P18887 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC18.53■□□□□ 0.56
XRCC1P18887 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
XRCC1P18887 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
XRCC1P18887 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC18.53■□□□□ 0.56
XRCC1P18887 AL512604.3-201ENST00000569583 964 ntBASIC18.53■□□□□ 0.56
XRCC1P18887 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC18.53■□□□□ 0.56
XRCC1P18887 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
XRCC1P18887 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC18.53■□□□□ 0.56
XRCC1P18887 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
XRCC1P18887 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
XRCC1P18887 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
XRCC1P18887 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
XRCC1P18887 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
XRCC1P18887 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC18.53■□□□□ 0.56
XRCC1P18887 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
XRCC1P18887 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
XRCC1P18887 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
XRCC1P18887 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
XRCC1P18887 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
XRCC1P18887 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
XRCC1P18887 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC18.52■□□□□ 0.56
XRCC1P18887 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
XRCC1P18887 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
XRCC1P18887 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
XRCC1P18887 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
XRCC1P18887 AP000997.3-201ENST00000623333 2250 ntBASIC18.52■□□□□ 0.56
XRCC1P18887 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
XRCC1P18887 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
XRCC1P18887 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
XRCC1P18887 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC18.52■□□□□ 0.56
XRCC1P18887 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
XRCC1P18887 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
XRCC1P18887 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
XRCC1P18887 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC18.52■□□□□ 0.56
XRCC1P18887 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC18.52■□□□□ 0.56
XRCC1P18887 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC18.52■□□□□ 0.56
XRCC1P18887 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC18.52■□□□□ 0.56
XRCC1P18887 AP003041.3-201ENST00000527151 707 ntBASIC18.52■□□□□ 0.56
XRCC1P18887 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC18.52■□□□□ 0.56
XRCC1P18887 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.56
XRCC1P18887 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC18.52■□□□□ 0.56
XRCC1P18887 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC18.52■□□□□ 0.56
XRCC1P18887 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC18.52■□□□□ 0.56
XRCC1P18887 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC18.52■□□□□ 0.56
XRCC1P18887 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
XRCC1P18887 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
XRCC1P18887 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.55
XRCC1P18887 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.55
XRCC1P18887 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC18.52■□□□□ 0.55
XRCC1P18887 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC18.52■□□□□ 0.55
XRCC1P18887 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
XRCC1P18887 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC18.52■□□□□ 0.55
XRCC1P18887 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
XRCC1P18887 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
XRCC1P18887 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
XRCC1P18887 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
XRCC1P18887 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
XRCC1P18887 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
XRCC1P18887 NOC2LP2-201ENST00000407594 1944 ntBASIC18.51■□□□□ 0.55
XRCC1P18887 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC18.51■□□□□ 0.55
XRCC1P18887 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
XRCC1P18887 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
XRCC1P18887 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
XRCC1P18887 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
XRCC1P18887 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
XRCC1P18887 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
XRCC1P18887 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
XRCC1P18887 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC18.51■□□□□ 0.55
XRCC1P18887 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC18.51■□□□□ 0.55
XRCC1P18887 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC18.51■□□□□ 0.55
XRCC1P18887 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC18.51■□□□□ 0.55
XRCC1P18887 AL138966.2-201ENST00000621997 464 ntBASIC18.51■□□□□ 0.55
XRCC1P18887 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
XRCC1P18887 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC18.51■□□□□ 0.55
XRCC1P18887 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
XRCC1P18887 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC18.51■□□□□ 0.55
XRCC1P18887 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
XRCC1P18887 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
XRCC1P18887 GAS2L1P1-201ENST00000420145 1480 ntBASIC18.51■□□□□ 0.55
XRCC1P18887 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC18.51■□□□□ 0.55
XRCC1P18887 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
XRCC1P18887 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
XRCC1P18887 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
XRCC1P18887 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
XRCC1P18887 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
XRCC1P18887 AC093525.10-201ENST00000625130 1569 ntBASIC18.51■□□□□ 0.55
XRCC1P18887 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
XRCC1P18887 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC18.5■□□□□ 0.55
XRCC1P18887 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms