Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PDLIM1O00151 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PDLIM1O00151 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
PDLIM1O00151 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PDLIM1O00151 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PDLIM1O00151 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PDLIM1O00151 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PDLIM1O00151 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC17.7■□□□□ 0.42
PDLIM1O00151 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC17.7■□□□□ 0.42
PDLIM1O00151 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PDLIM1O00151 ABHD17AP1-201ENST00000358206 933 ntBASIC17.7■□□□□ 0.42
PDLIM1O00151 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC17.7■□□□□ 0.42
PDLIM1O00151 GGT1-206ENST00000404223 952 ntTSL 2 BASIC17.7■□□□□ 0.42
PDLIM1O00151 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC17.7■□□□□ 0.42
PDLIM1O00151 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC17.7■□□□□ 0.42
PDLIM1O00151 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC17.7■□□□□ 0.42
PDLIM1O00151 TSPY20P-201ENST00000450910 630 ntBASIC17.7■□□□□ 0.42
PDLIM1O00151 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC17.7■□□□□ 0.42
PDLIM1O00151 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC17.7■□□□□ 0.42
PDLIM1O00151 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
PDLIM1O00151 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PDLIM1O00151 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PDLIM1O00151 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
PDLIM1O00151 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
PDLIM1O00151 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PDLIM1O00151 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PDLIM1O00151 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC17.7■□□□□ 0.42
PDLIM1O00151 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PDLIM1O00151 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
PDLIM1O00151 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PDLIM1O00151 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PDLIM1O00151 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC17.69■□□□□ 0.42
PDLIM1O00151 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
PDLIM1O00151 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
PDLIM1O00151 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PDLIM1O00151 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PDLIM1O00151 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
PDLIM1O00151 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
PDLIM1O00151 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PDLIM1O00151 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PDLIM1O00151 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PDLIM1O00151 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PDLIM1O00151 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PDLIM1O00151 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
PDLIM1O00151 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC17.69■□□□□ 0.42
PDLIM1O00151 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PDLIM1O00151 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
PDLIM1O00151 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PDLIM1O00151 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC17.69■□□□□ 0.42
PDLIM1O00151 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
PDLIM1O00151 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
PDLIM1O00151 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC17.69■□□□□ 0.42
PDLIM1O00151 AC008403.3-201ENST00000598924 454 ntBASIC17.69■□□□□ 0.42
PDLIM1O00151 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC17.69■□□□□ 0.42
PDLIM1O00151 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PDLIM1O00151 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PDLIM1O00151 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
PDLIM1O00151 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
PDLIM1O00151 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
PDLIM1O00151 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC17.69■□□□□ 0.42
PDLIM1O00151 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC17.69■□□□□ 0.42
PDLIM1O00151 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PDLIM1O00151 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
PDLIM1O00151 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC17.69■□□□□ 0.42
PDLIM1O00151 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
PDLIM1O00151 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
PDLIM1O00151 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PDLIM1O00151 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PDLIM1O00151 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC17.68■□□□□ 0.42
PDLIM1O00151 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
PDLIM1O00151 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC17.68■□□□□ 0.42
PDLIM1O00151 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC17.68■□□□□ 0.42
PDLIM1O00151 AC134043.2-201ENST00000624206 2238 ntBASIC17.68■□□□□ 0.42
PDLIM1O00151 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
PDLIM1O00151 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC17.68■□□□□ 0.42
PDLIM1O00151 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
PDLIM1O00151 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PDLIM1O00151 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PDLIM1O00151 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PDLIM1O00151 CICP6-201ENST00000457191 2729 ntBASIC17.68■□□□□ 0.42
PDLIM1O00151 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PDLIM1O00151 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PDLIM1O00151 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PDLIM1O00151 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC17.68■□□□□ 0.42
PDLIM1O00151 POU5F1P3-201ENST00000428824 1078 ntBASIC17.68■□□□□ 0.42
PDLIM1O00151 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
PDLIM1O00151 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC17.68■□□□□ 0.42
PDLIM1O00151 OR2A1-AS1-207ENST00000486094 819 ntBASIC17.68■□□□□ 0.42
PDLIM1O00151 AC026366.1-201ENST00000488803 879 ntBASIC17.68■□□□□ 0.42
PDLIM1O00151 UNC93B4-201ENST00000505679 747 ntBASIC17.68■□□□□ 0.42
PDLIM1O00151 ADM-205ENST00000528544 586 ntTSL 2 BASIC17.68■□□□□ 0.42
PDLIM1O00151 AP003097.1-201ENST00000530657 1135 ntBASIC17.68■□□□□ 0.42
PDLIM1O00151 REXO2-208ENST00000539754 791 ntTSL 2 BASIC17.68■□□□□ 0.42
PDLIM1O00151 MMAB-206ENST00000540016 945 ntTSL 3 BASIC17.68■□□□□ 0.42
PDLIM1O00151 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC17.68■□□□□ 0.42
PDLIM1O00151 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
PDLIM1O00151 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PDLIM1O00151 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC17.68■□□□□ 0.42
PDLIM1O00151 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC17.68■□□□□ 0.42
PDLIM1O00151 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 59.8 ms