Protein–RNA interactions for Protein: A0A0A6YWV4

Trbc1, T cell receptor beta, constant region 1 (Fragment), mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbc1A0A0A6YWV4 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC14.45□□□□□ -0.1
Trbc1A0A0A6YWV4 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trbc1A0A0A6YWV4 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC14.45□□□□□ -0.1
Trbc1A0A0A6YWV4 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trbc1A0A0A6YWV4 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trbc1A0A0A6YWV4 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trbc1A0A0A6YWV4 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
Trbc1A0A0A6YWV4 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trbc1A0A0A6YWV4 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trbc1A0A0A6YWV4 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trbc1A0A0A6YWV4 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trbc1A0A0A6YWV4 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC14.45□□□□□ -0.1
Trbc1A0A0A6YWV4 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trbc1A0A0A6YWV4 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trbc1A0A0A6YWV4 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trbc1A0A0A6YWV4 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC14.45□□□□□ -0.1
Trbc1A0A0A6YWV4 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trbc1A0A0A6YWV4 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trbc1A0A0A6YWV4 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trbc1A0A0A6YWV4 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trbc1A0A0A6YWV4 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trbc1A0A0A6YWV4 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trbc1A0A0A6YWV4 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trbc1A0A0A6YWV4 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trbc1A0A0A6YWV4 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trbc1A0A0A6YWV4 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trbc1A0A0A6YWV4 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC14.44□□□□□ -0.1
Trbc1A0A0A6YWV4 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trbc1A0A0A6YWV4 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Trbc1A0A0A6YWV4 Gm27459-201ENSMUST00000184860 107 ntBASIC14.44□□□□□ -0.1
Trbc1A0A0A6YWV4 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC14.44□□□□□ -0.1
Trbc1A0A0A6YWV4 Gm43347-201ENSMUST00000200226 580 ntBASIC14.44□□□□□ -0.1
Trbc1A0A0A6YWV4 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC14.44□□□□□ -0.1
Trbc1A0A0A6YWV4 Cmtm5-203ENSMUST00000227441 610 ntBASIC14.44□□□□□ -0.1
Trbc1A0A0A6YWV4 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trbc1A0A0A6YWV4 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Trbc1A0A0A6YWV4 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trbc1A0A0A6YWV4 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trbc1A0A0A6YWV4 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trbc1A0A0A6YWV4 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC14.44□□□□□ -0.1
Trbc1A0A0A6YWV4 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trbc1A0A0A6YWV4 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
Trbc1A0A0A6YWV4 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trbc1A0A0A6YWV4 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trbc1A0A0A6YWV4 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trbc1A0A0A6YWV4 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trbc1A0A0A6YWV4 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trbc1A0A0A6YWV4 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trbc1A0A0A6YWV4 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Trbc1A0A0A6YWV4 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trbc1A0A0A6YWV4 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trbc1A0A0A6YWV4 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trbc1A0A0A6YWV4 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trbc1A0A0A6YWV4 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trbc1A0A0A6YWV4 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trbc1A0A0A6YWV4 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Trbc1A0A0A6YWV4 Gm25406-201ENSMUST00000157599 105 ntBASIC14.43□□□□□ -0.1
Trbc1A0A0A6YWV4 Gm25745-201ENSMUST00000174945 133 ntBASIC14.43□□□□□ -0.1
Trbc1A0A0A6YWV4 Gm8349-201ENSMUST00000182720 1003 ntBASIC14.43□□□□□ -0.1
Trbc1A0A0A6YWV4 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC14.43□□□□□ -0.1
Trbc1A0A0A6YWV4 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trbc1A0A0A6YWV4 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
Trbc1A0A0A6YWV4 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trbc1A0A0A6YWV4 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trbc1A0A0A6YWV4 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Trbc1A0A0A6YWV4 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Trbc1A0A0A6YWV4 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trbc1A0A0A6YWV4 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC14.43□□□□□ -0.1
Trbc1A0A0A6YWV4 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trbc1A0A0A6YWV4 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trbc1A0A0A6YWV4 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Trbc1A0A0A6YWV4 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trbc1A0A0A6YWV4 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trbc1A0A0A6YWV4 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trbc1A0A0A6YWV4 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trbc1A0A0A6YWV4 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC14.43□□□□□ -0.1
Trbc1A0A0A6YWV4 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Trbc1A0A0A6YWV4 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trbc1A0A0A6YWV4 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC14.42□□□□□ -0.1
Trbc1A0A0A6YWV4 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trbc1A0A0A6YWV4 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trbc1A0A0A6YWV4 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Trbc1A0A0A6YWV4 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC14.42□□□□□ -0.1
Trbc1A0A0A6YWV4 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trbc1A0A0A6YWV4 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trbc1A0A0A6YWV4 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trbc1A0A0A6YWV4 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trbc1A0A0A6YWV4 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Trbc1A0A0A6YWV4 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trbc1A0A0A6YWV4 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trbc1A0A0A6YWV4 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Trbc1A0A0A6YWV4 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trbc1A0A0A6YWV4 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC14.42□□□□□ -0.1
Trbc1A0A0A6YWV4 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trbc1A0A0A6YWV4 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC14.42□□□□□ -0.1
Trbc1A0A0A6YWV4 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trbc1A0A0A6YWV4 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trbc1A0A0A6YWV4 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trbc1A0A0A6YWV4 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trbc1A0A0A6YWV4 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms