Protein–RNA interactions for Protein: A0A075B6A4

Trav12d-3, T cell receptor alpha variable 12D-3 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-3A0A075B6A4 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav12d-3A0A075B6A4 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Trav12d-3A0A075B6A4 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Trav12d-3A0A075B6A4 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav12d-3A0A075B6A4 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav12d-3A0A075B6A4 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav12d-3A0A075B6A4 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trav12d-3A0A075B6A4 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav12d-3A0A075B6A4 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav12d-3A0A075B6A4 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav12d-3A0A075B6A4 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trav12d-3A0A075B6A4 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav12d-3A0A075B6A4 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Trav12d-3A0A075B6A4 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trav12d-3A0A075B6A4 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav12d-3A0A075B6A4 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC11.76□□□□□ -0.53
Trav12d-3A0A075B6A4 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav12d-3A0A075B6A4 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Trav12d-3A0A075B6A4 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Trav12d-3A0A075B6A4 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC11.76□□□□□ -0.53
Trav12d-3A0A075B6A4 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trav12d-3A0A075B6A4 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trav12d-3A0A075B6A4 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav12d-3A0A075B6A4 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav12d-3A0A075B6A4 Gm32996-201ENSMUST00000199828 1447 ntBASIC11.76□□□□□ -0.53
Trav12d-3A0A075B6A4 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav12d-3A0A075B6A4 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav12d-3A0A075B6A4 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav12d-3A0A075B6A4 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Trav12d-3A0A075B6A4 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav12d-3A0A075B6A4 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav12d-3A0A075B6A4 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav12d-3A0A075B6A4 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav12d-3A0A075B6A4 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Trav12d-3A0A075B6A4 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trav12d-3A0A075B6A4 Ap5m1-205ENSMUST00000227431 3757 ntBASIC11.75□□□□□ -0.53
Trav12d-3A0A075B6A4 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Trav12d-3A0A075B6A4 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trav12d-3A0A075B6A4 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav12d-3A0A075B6A4 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Trav12d-3A0A075B6A4 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC11.75□□□□□ -0.53
Trav12d-3A0A075B6A4 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC11.75□□□□□ -0.53
Trav12d-3A0A075B6A4 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav12d-3A0A075B6A4 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC11.75□□□□□ -0.53
Trav12d-3A0A075B6A4 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Trav12d-3A0A075B6A4 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav12d-3A0A075B6A4 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav12d-3A0A075B6A4 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav12d-3A0A075B6A4 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC11.75□□□□□ -0.53
Trav12d-3A0A075B6A4 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav12d-3A0A075B6A4 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC11.75□□□□□ -0.53
Trav12d-3A0A075B6A4 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav12d-3A0A075B6A4 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trav12d-3A0A075B6A4 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trav12d-3A0A075B6A4 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav12d-3A0A075B6A4 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav12d-3A0A075B6A4 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trav12d-3A0A075B6A4 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC11.74□□□□□ -0.53
Trav12d-3A0A075B6A4 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trav12d-3A0A075B6A4 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trav12d-3A0A075B6A4 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav12d-3A0A075B6A4 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trav12d-3A0A075B6A4 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Trav12d-3A0A075B6A4 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav12d-3A0A075B6A4 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav12d-3A0A075B6A4 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trav12d-3A0A075B6A4 Ptprs-211ENSMUST00000223859 5588 ntBASIC11.74□□□□□ -0.53
Trav12d-3A0A075B6A4 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav12d-3A0A075B6A4 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trav12d-3A0A075B6A4 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC11.74□□□□□ -0.53
Trav12d-3A0A075B6A4 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC11.74□□□□□ -0.53
Trav12d-3A0A075B6A4 Gm6211-202ENSMUST00000167849 925 ntBASIC11.74□□□□□ -0.53
Trav12d-3A0A075B6A4 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav12d-3A0A075B6A4 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav12d-3A0A075B6A4 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trav12d-3A0A075B6A4 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC11.74□□□□□ -0.53
Trav12d-3A0A075B6A4 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav12d-3A0A075B6A4 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav12d-3A0A075B6A4 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC11.74□□□□□ -0.53
Trav12d-3A0A075B6A4 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav12d-3A0A075B6A4 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC11.74□□□□□ -0.53
Trav12d-3A0A075B6A4 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav12d-3A0A075B6A4 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav12d-3A0A075B6A4 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Trav12d-3A0A075B6A4 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav12d-3A0A075B6A4 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav12d-3A0A075B6A4 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav12d-3A0A075B6A4 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav12d-3A0A075B6A4 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC11.74□□□□□ -0.53
Trav12d-3A0A075B6A4 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC11.74□□□□□ -0.53
Trav12d-3A0A075B6A4 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav12d-3A0A075B6A4 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav12d-3A0A075B6A4 Gm38058-201ENSMUST00000194323 4368 ntBASIC11.74□□□□□ -0.53
Trav12d-3A0A075B6A4 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Trav12d-3A0A075B6A4 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Trav12d-3A0A075B6A4 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav12d-3A0A075B6A4 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav12d-3A0A075B6A4 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Trav12d-3A0A075B6A4 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav12d-3A0A075B6A4 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 50.3 ms