Protein–RNA interactions for Protein: Q9Y5P3

RAI2, Retinoic acid-induced protein 2, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI2Q9Y5P3 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RAI2Q9Y5P3 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RAI2Q9Y5P3 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC18.81■□□□□ 0.6
RAI2Q9Y5P3 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
RAI2Q9Y5P3 CD70-202ENST00000423145 881 ntTSL 2 BASIC18.81■□□□□ 0.6
RAI2Q9Y5P3 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC18.81■□□□□ 0.6
RAI2Q9Y5P3 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
RAI2Q9Y5P3 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC18.81■□□□□ 0.6
RAI2Q9Y5P3 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
RAI2Q9Y5P3 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
RAI2Q9Y5P3 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC18.81■□□□□ 0.6
RAI2Q9Y5P3 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC18.81■□□□□ 0.6
RAI2Q9Y5P3 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC18.81■□□□□ 0.6
RAI2Q9Y5P3 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
RAI2Q9Y5P3 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
RAI2Q9Y5P3 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RAI2Q9Y5P3 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RAI2Q9Y5P3 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RAI2Q9Y5P3 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
RAI2Q9Y5P3 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
RAI2Q9Y5P3 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RAI2Q9Y5P3 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
RAI2Q9Y5P3 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
RAI2Q9Y5P3 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC18.8■□□□□ 0.6
RAI2Q9Y5P3 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC18.8■□□□□ 0.6
RAI2Q9Y5P3 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RAI2Q9Y5P3 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RAI2Q9Y5P3 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RAI2Q9Y5P3 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RAI2Q9Y5P3 ISCU-203ENST00000431221 799 ntTSL 2 BASIC18.8■□□□□ 0.6
RAI2Q9Y5P3 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC18.8■□□□□ 0.6
RAI2Q9Y5P3 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
RAI2Q9Y5P3 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
RAI2Q9Y5P3 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RAI2Q9Y5P3 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC18.8■□□□□ 0.6
RAI2Q9Y5P3 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
RAI2Q9Y5P3 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RAI2Q9Y5P3 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RAI2Q9Y5P3 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
RAI2Q9Y5P3 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
RAI2Q9Y5P3 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC18.8■□□□□ 0.6
RAI2Q9Y5P3 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
RAI2Q9Y5P3 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RAI2Q9Y5P3 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RAI2Q9Y5P3 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
RAI2Q9Y5P3 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
RAI2Q9Y5P3 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RAI2Q9Y5P3 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC18.79■□□□□ 0.6
RAI2Q9Y5P3 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC18.79■□□□□ 0.6
RAI2Q9Y5P3 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
RAI2Q9Y5P3 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RAI2Q9Y5P3 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC18.79■□□□□ 0.6
RAI2Q9Y5P3 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
RAI2Q9Y5P3 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RAI2Q9Y5P3 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RAI2Q9Y5P3 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RAI2Q9Y5P3 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC18.79■□□□□ 0.6
RAI2Q9Y5P3 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC18.79■□□□□ 0.6
RAI2Q9Y5P3 KRT18P23-201ENST00000435622 1283 ntBASIC18.79■□□□□ 0.6
RAI2Q9Y5P3 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC18.79■□□□□ 0.6
RAI2Q9Y5P3 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RAI2Q9Y5P3 NEK4P2-201ENST00000580004 1012 ntBASIC18.79■□□□□ 0.6
RAI2Q9Y5P3 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC18.79■□□□□ 0.6
RAI2Q9Y5P3 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC18.79■□□□□ 0.6
RAI2Q9Y5P3 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RAI2Q9Y5P3 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC18.79■□□□□ 0.6
RAI2Q9Y5P3 AL499627.1-201ENST00000569373 2188 ntBASIC18.79■□□□□ 0.6
RAI2Q9Y5P3 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RAI2Q9Y5P3 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC18.79■□□□□ 0.6
RAI2Q9Y5P3 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
RAI2Q9Y5P3 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC18.79■□□□□ 0.6
RAI2Q9Y5P3 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RAI2Q9Y5P3 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RAI2Q9Y5P3 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC18.78■□□□□ 0.6
RAI2Q9Y5P3 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RAI2Q9Y5P3 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
RAI2Q9Y5P3 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RAI2Q9Y5P3 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
RAI2Q9Y5P3 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RAI2Q9Y5P3 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RAI2Q9Y5P3 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RAI2Q9Y5P3 GAD2-202ENST00000376248 680 ntTSL 5 BASIC18.78■□□□□ 0.6
RAI2Q9Y5P3 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
RAI2Q9Y5P3 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RAI2Q9Y5P3 AK4P3-201ENST00000418260 669 ntBASIC18.78■□□□□ 0.6
RAI2Q9Y5P3 BX664615.1-201ENST00000443558 458 ntBASIC18.78■□□□□ 0.6
RAI2Q9Y5P3 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
RAI2Q9Y5P3 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC18.78■□□□□ 0.6
RAI2Q9Y5P3 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RAI2Q9Y5P3 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
RAI2Q9Y5P3 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC18.78■□□□□ 0.6
RAI2Q9Y5P3 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC18.78■□□□□ 0.6
RAI2Q9Y5P3 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC18.78■□□□□ 0.6
RAI2Q9Y5P3 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RAI2Q9Y5P3 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC18.78■□□□□ 0.6
RAI2Q9Y5P3 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
RAI2Q9Y5P3 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
RAI2Q9Y5P3 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
RAI2Q9Y5P3 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC18.78■□□□□ 0.6
RAI2Q9Y5P3 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms