Protein–RNA interactions for Protein: Q9UK58

CCNL1, Cyclin-L1, humanhuman

Predicted RBP Predictions only

Length 526 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1Q9UK58 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC23.62■■□□□ 1.37
CCNL1Q9UK58 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC23.62■■□□□ 1.37
CCNL1Q9UK58 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
CCNL1Q9UK58 DDT-203ENST00000403754 569 ntTSL 3 BASIC23.62■■□□□ 1.37
CCNL1Q9UK58 DDT-206ENST00000430101 573 ntTSL 2 BASIC23.62■■□□□ 1.37
CCNL1Q9UK58 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC23.62■■□□□ 1.37
CCNL1Q9UK58 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC23.62■■□□□ 1.37
CCNL1Q9UK58 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC23.62■■□□□ 1.37
CCNL1Q9UK58 IGHV3-22-201ENST00000520721 359 ntBASIC23.62■■□□□ 1.37
CCNL1Q9UK58 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC23.62■■□□□ 1.37
CCNL1Q9UK58 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC23.62■■□□□ 1.37
CCNL1Q9UK58 AC140113.2-201ENST00000604370 208 ntBASIC23.62■■□□□ 1.37
CCNL1Q9UK58 AP001269.4-201ENST00000609611 512 ntBASIC23.62■■□□□ 1.37
CCNL1Q9UK58 AC027601.4-201ENST00000611259 610 ntBASIC23.62■■□□□ 1.37
CCNL1Q9UK58 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC23.62■■□□□ 1.37
CCNL1Q9UK58 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
CCNL1Q9UK58 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC23.62■■□□□ 1.37
CCNL1Q9UK58 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
CCNL1Q9UK58 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC23.62■■□□□ 1.37
CCNL1Q9UK58 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC23.62■■□□□ 1.37
CCNL1Q9UK58 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
CCNL1Q9UK58 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
CCNL1Q9UK58 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC23.62■■□□□ 1.37
CCNL1Q9UK58 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC23.62■■□□□ 1.37
CCNL1Q9UK58 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC23.62■■□□□ 1.37
CCNL1Q9UK58 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC23.61■■□□□ 1.37
CCNL1Q9UK58 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC23.61■■□□□ 1.37
CCNL1Q9UK58 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
CCNL1Q9UK58 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC23.61■■□□□ 1.37
CCNL1Q9UK58 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
CCNL1Q9UK58 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
CCNL1Q9UK58 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC23.61■■□□□ 1.37
CCNL1Q9UK58 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC23.61■■□□□ 1.37
CCNL1Q9UK58 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC23.61■■□□□ 1.37
CCNL1Q9UK58 UPF3AP3-201ENST00000420996 769 ntBASIC23.61■■□□□ 1.37
CCNL1Q9UK58 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC23.61■■□□□ 1.37
CCNL1Q9UK58 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC23.61■■□□□ 1.37
CCNL1Q9UK58 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC23.61■■□□□ 1.37
CCNL1Q9UK58 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
CCNL1Q9UK58 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
CCNL1Q9UK58 AC010327.4-202ENST00000591484 748 ntBASIC23.61■■□□□ 1.37
CCNL1Q9UK58 AC005336.2-201ENST00000593183 939 ntBASIC23.61■■□□□ 1.37
CCNL1Q9UK58 AL356488.2-201ENST00000602755 427 ntBASIC23.61■■□□□ 1.37
CCNL1Q9UK58 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC23.61■■□□□ 1.37
CCNL1Q9UK58 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC23.61■■□□□ 1.37
CCNL1Q9UK58 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC23.61■■□□□ 1.37
CCNL1Q9UK58 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC23.61■■□□□ 1.37
CCNL1Q9UK58 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC23.61■■□□□ 1.37
CCNL1Q9UK58 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC23.61■■□□□ 1.37
CCNL1Q9UK58 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
CCNL1Q9UK58 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC23.61■■□□□ 1.37
CCNL1Q9UK58 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC23.61■■□□□ 1.37
CCNL1Q9UK58 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC23.61■■□□□ 1.37
CCNL1Q9UK58 LINC01521-201ENST00000504184 1943 ntBASIC23.61■■□□□ 1.37
CCNL1Q9UK58 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC23.6■■□□□ 1.37
CCNL1Q9UK58 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC23.6■■□□□ 1.37
CCNL1Q9UK58 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC23.6■■□□□ 1.37
CCNL1Q9UK58 PMS2P2-201ENST00000425039 1128 ntBASIC23.6■■□□□ 1.37
CCNL1Q9UK58 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC23.6■■□□□ 1.37
CCNL1Q9UK58 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
CCNL1Q9UK58 AC098831.1-202ENST00000438821 336 ntBASIC23.6■■□□□ 1.37
CCNL1Q9UK58 CD63-204ENST00000546939 779 ntTSL 3 BASIC23.6■■□□□ 1.37
CCNL1Q9UK58 COX5A-204ENST00000567270 579 ntTSL 3 BASIC23.6■■□□□ 1.37
CCNL1Q9UK58 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
CCNL1Q9UK58 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC23.6■■□□□ 1.37
CCNL1Q9UK58 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
CCNL1Q9UK58 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
CCNL1Q9UK58 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
CCNL1Q9UK58 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC23.59■■□□□ 1.37
CCNL1Q9UK58 PWWP2AP1-201ENST00000429776 2273 ntBASIC23.59■■□□□ 1.37
CCNL1Q9UK58 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC23.59■■□□□ 1.37
CCNL1Q9UK58 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC23.59■■□□□ 1.37
CCNL1Q9UK58 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
CCNL1Q9UK58 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
CCNL1Q9UK58 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
CCNL1Q9UK58 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC23.59■■□□□ 1.37
CCNL1Q9UK58 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
CCNL1Q9UK58 MED15P5-201ENST00000423150 992 ntBASIC23.59■■□□□ 1.37
CCNL1Q9UK58 PAM16-208ENST00000573553 722 ntTSL 2 BASIC23.59■■□□□ 1.37
CCNL1Q9UK58 GZMM-202ENST00000592501 941 ntTSL 3 BASIC23.59■■□□□ 1.37
CCNL1Q9UK58 FAM197Y3-203ENST00000618346 717 ntBASIC23.59■■□□□ 1.37
CCNL1Q9UK58 AC068587.9-201ENST00000641814 219 ntBASIC23.59■■□□□ 1.37
CCNL1Q9UK58 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC23.59■■□□□ 1.37
CCNL1Q9UK58 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
CCNL1Q9UK58 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
CCNL1Q9UK58 UBQLN4P1-201ENST00000461599 1801 ntBASIC23.59■■□□□ 1.37
CCNL1Q9UK58 AL357033.4-201ENST00000617703 1807 ntBASIC23.59■■□□□ 1.37
CCNL1Q9UK58 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
CCNL1Q9UK58 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
CCNL1Q9UK58 KRT8P50-201ENST00000562022 1438 ntBASIC23.59■■□□□ 1.37
CCNL1Q9UK58 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC23.58■■□□□ 1.37
CCNL1Q9UK58 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC23.58■■□□□ 1.37
CCNL1Q9UK58 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
CCNL1Q9UK58 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC23.58■■□□□ 1.37
CCNL1Q9UK58 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC23.58■■□□□ 1.37
CCNL1Q9UK58 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC23.58■■□□□ 1.37
CCNL1Q9UK58 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC23.58■■□□□ 1.37
CCNL1Q9UK58 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC23.58■■□□□ 1.37
CCNL1Q9UK58 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC23.58■■□□□ 1.37
CCNL1Q9UK58 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC23.58■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms