Protein–RNA interactions for Protein: Q9NQT6

FSCN3, Fascin-3, humanhuman

Predictions only

Length 498 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FSCN3Q9NQT6 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
FSCN3Q9NQT6 EMD-201ENST00000369835 966 ntTSL 3 BASIC18.11■□□□□ 0.49
FSCN3Q9NQT6 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
FSCN3Q9NQT6 MIR1233-2-201ENST00000408138 82 ntBASIC18.11■□□□□ 0.49
FSCN3Q9NQT6 MIR1233-1-201ENST00000408722 82 ntBASIC18.11■□□□□ 0.49
FSCN3Q9NQT6 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC18.11■□□□□ 0.49
FSCN3Q9NQT6 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC18.11■□□□□ 0.49
FSCN3Q9NQT6 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC18.11■□□□□ 0.49
FSCN3Q9NQT6 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC18.11■□□□□ 0.49
FSCN3Q9NQT6 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC18.11■□□□□ 0.49
FSCN3Q9NQT6 MIR5100-201ENST00000579544 119 ntBASIC18.11■□□□□ 0.49
FSCN3Q9NQT6 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC18.11■□□□□ 0.49
FSCN3Q9NQT6 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
FSCN3Q9NQT6 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC18.11■□□□□ 0.49
FSCN3Q9NQT6 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
FSCN3Q9NQT6 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC18.11■□□□□ 0.49
FSCN3Q9NQT6 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
FSCN3Q9NQT6 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC18.11■□□□□ 0.49
FSCN3Q9NQT6 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
FSCN3Q9NQT6 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
FSCN3Q9NQT6 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC18.11■□□□□ 0.49
FSCN3Q9NQT6 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC18.11■□□□□ 0.49
FSCN3Q9NQT6 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
FSCN3Q9NQT6 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
FSCN3Q9NQT6 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
FSCN3Q9NQT6 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
FSCN3Q9NQT6 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
FSCN3Q9NQT6 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
FSCN3Q9NQT6 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
FSCN3Q9NQT6 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
FSCN3Q9NQT6 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
FSCN3Q9NQT6 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
FSCN3Q9NQT6 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
FSCN3Q9NQT6 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
FSCN3Q9NQT6 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC18.1■□□□□ 0.49
FSCN3Q9NQT6 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC18.1■□□□□ 0.49
FSCN3Q9NQT6 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
FSCN3Q9NQT6 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC18.1■□□□□ 0.49
FSCN3Q9NQT6 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
FSCN3Q9NQT6 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC18.1■□□□□ 0.49
FSCN3Q9NQT6 AC073648.2-201ENST00000510116 352 ntBASIC18.1■□□□□ 0.49
FSCN3Q9NQT6 KRT18P58-201ENST00000527480 1120 ntBASIC18.1■□□□□ 0.49
FSCN3Q9NQT6 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC18.1■□□□□ 0.49
FSCN3Q9NQT6 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
FSCN3Q9NQT6 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC18.1■□□□□ 0.49
FSCN3Q9NQT6 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
FSCN3Q9NQT6 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
FSCN3Q9NQT6 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
FSCN3Q9NQT6 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
FSCN3Q9NQT6 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC18.1■□□□□ 0.49
FSCN3Q9NQT6 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
FSCN3Q9NQT6 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
FSCN3Q9NQT6 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
FSCN3Q9NQT6 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
FSCN3Q9NQT6 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
FSCN3Q9NQT6 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
FSCN3Q9NQT6 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
FSCN3Q9NQT6 FEM1AP3-201ENST00000403722 1741 ntBASIC18.09■□□□□ 0.49
FSCN3Q9NQT6 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
FSCN3Q9NQT6 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC18.09■□□□□ 0.49
FSCN3Q9NQT6 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
FSCN3Q9NQT6 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
FSCN3Q9NQT6 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
FSCN3Q9NQT6 AC125437.2-201ENST00000625180 2167 ntBASIC18.09■□□□□ 0.49
FSCN3Q9NQT6 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
FSCN3Q9NQT6 AC132008.2-207ENST00000454517 770 ntBASIC18.09■□□□□ 0.49
FSCN3Q9NQT6 AF186996.4-201ENST00000467186 377 ntBASIC18.09■□□□□ 0.49
FSCN3Q9NQT6 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC18.09■□□□□ 0.49
FSCN3Q9NQT6 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC18.09■□□□□ 0.49
FSCN3Q9NQT6 AC008608.2-201ENST00000606089 416 ntBASIC18.09■□□□□ 0.49
FSCN3Q9NQT6 MIR7706-201ENST00000613747 67 ntBASIC18.09■□□□□ 0.49
FSCN3Q9NQT6 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC18.09■□□□□ 0.49
FSCN3Q9NQT6 UBQLN4P1-201ENST00000461599 1801 ntBASIC18.09■□□□□ 0.49
FSCN3Q9NQT6 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
FSCN3Q9NQT6 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
FSCN3Q9NQT6 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
FSCN3Q9NQT6 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
FSCN3Q9NQT6 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
FSCN3Q9NQT6 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
FSCN3Q9NQT6 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC18.08■□□□□ 0.49
FSCN3Q9NQT6 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
FSCN3Q9NQT6 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC18.08■□□□□ 0.49
FSCN3Q9NQT6 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC18.08■□□□□ 0.49
FSCN3Q9NQT6 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
FSCN3Q9NQT6 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.49
FSCN3Q9NQT6 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
FSCN3Q9NQT6 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
FSCN3Q9NQT6 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC18.08■□□□□ 0.48
FSCN3Q9NQT6 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
FSCN3Q9NQT6 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
FSCN3Q9NQT6 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC18.08■□□□□ 0.48
FSCN3Q9NQT6 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC18.08■□□□□ 0.48
FSCN3Q9NQT6 AC106730.1-201ENST00000566722 1090 ntBASIC18.08■□□□□ 0.48
FSCN3Q9NQT6 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC18.08■□□□□ 0.48
FSCN3Q9NQT6 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC18.08■□□□□ 0.48
FSCN3Q9NQT6 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
FSCN3Q9NQT6 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
FSCN3Q9NQT6 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
FSCN3Q9NQT6 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
FSCN3Q9NQT6 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC18.08■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms