Protein–RNA interactions for Protein: Q96T58

SPEN, Msx2-interacting protein, humanhuman

Known RBP Predictions only

Length 3,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPENQ96T58 IGHGP-201ENST00000390555 1178 ntBASIC16.77■□□□□ 0.27
SPENQ96T58 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
SPENQ96T58 AP001005.1-201ENST00000571755 1248 ntBASIC16.77■□□□□ 0.27
SPENQ96T58 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
SPENQ96T58 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
SPENQ96T58 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC16.77■□□□□ 0.27
SPENQ96T58 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SPENQ96T58 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SPENQ96T58 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC16.76■□□□□ 0.27
SPENQ96T58 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC16.76■□□□□ 0.27
SPENQ96T58 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SPENQ96T58 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SPENQ96T58 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SPENQ96T58 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
SPENQ96T58 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SPENQ96T58 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SPENQ96T58 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SPENQ96T58 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC16.76■□□□□ 0.27
SPENQ96T58 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC16.76■□□□□ 0.27
SPENQ96T58 GPX1P2-201ENST00000429271 606 ntBASIC16.76■□□□□ 0.27
SPENQ96T58 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC16.76■□□□□ 0.27
SPENQ96T58 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SPENQ96T58 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
SPENQ96T58 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC16.76■□□□□ 0.27
SPENQ96T58 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
SPENQ96T58 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
SPENQ96T58 FAM220CP-201ENST00000395253 831 ntBASIC16.76■□□□□ 0.27
SPENQ96T58 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC16.76■□□□□ 0.27
SPENQ96T58 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SPENQ96T58 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
SPENQ96T58 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SPENQ96T58 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SPENQ96T58 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC16.75■□□□□ 0.27
SPENQ96T58 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC16.75■□□□□ 0.27
SPENQ96T58 PMS2P2-201ENST00000425039 1128 ntBASIC16.75■□□□□ 0.27
SPENQ96T58 HNRNPDP1-201ENST00000439535 754 ntBASIC16.75■□□□□ 0.27
SPENQ96T58 NMU-202ENST00000505262 693 ntTSL 3 BASIC16.75■□□□□ 0.27
SPENQ96T58 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SPENQ96T58 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC16.75■□□□□ 0.27
SPENQ96T58 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SPENQ96T58 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SPENQ96T58 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC16.75■□□□□ 0.27
SPENQ96T58 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SPENQ96T58 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SPENQ96T58 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SPENQ96T58 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SPENQ96T58 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
SPENQ96T58 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC16.75■□□□□ 0.27
SPENQ96T58 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
SPENQ96T58 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC16.75■□□□□ 0.27
SPENQ96T58 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SPENQ96T58 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC16.75■□□□□ 0.27
SPENQ96T58 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC16.75■□□□□ 0.27
SPENQ96T58 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC16.75■□□□□ 0.27
SPENQ96T58 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC16.75■□□□□ 0.27
SPENQ96T58 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
SPENQ96T58 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC16.75■□□□□ 0.27
SPENQ96T58 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SPENQ96T58 AC022898.2-201ENST00000616822 1312 ntBASIC16.75■□□□□ 0.27
SPENQ96T58 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SPENQ96T58 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SPENQ96T58 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SPENQ96T58 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SPENQ96T58 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SPENQ96T58 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
SPENQ96T58 AC009065.1-201ENST00000564055 1225 ntBASIC16.75■□□□□ 0.27
SPENQ96T58 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SPENQ96T58 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC16.74■□□□□ 0.27
SPENQ96T58 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
SPENQ96T58 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SPENQ96T58 AC005336.2-201ENST00000593183 939 ntBASIC16.74■□□□□ 0.27
SPENQ96T58 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
SPENQ96T58 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SPENQ96T58 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SPENQ96T58 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SPENQ96T58 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SPENQ96T58 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC16.74■□□□□ 0.27
SPENQ96T58 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
SPENQ96T58 HOXB1-202ENST00000577092 1414 ntBASIC16.74■□□□□ 0.27
SPENQ96T58 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SPENQ96T58 RPSAP43-201ENST00000402237 625 ntBASIC16.74■□□□□ 0.27
SPENQ96T58 RNPS1P1-201ENST00000507437 918 ntBASIC16.74■□□□□ 0.27
SPENQ96T58 KRT18P58-201ENST00000527480 1120 ntBASIC16.74■□□□□ 0.27
SPENQ96T58 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
SPENQ96T58 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SPENQ96T58 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SPENQ96T58 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC16.74■□□□□ 0.27
SPENQ96T58 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SPENQ96T58 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC16.74■□□□□ 0.27
SPENQ96T58 IRX1P1-201ENST00000438849 1838 ntBASIC16.74■□□□□ 0.27
SPENQ96T58 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC16.74■□□□□ 0.27
SPENQ96T58 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC16.74■□□□□ 0.27
SPENQ96T58 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC16.74■□□□□ 0.27
SPENQ96T58 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SPENQ96T58 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC16.74■□□□□ 0.27
SPENQ96T58 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SPENQ96T58 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
SPENQ96T58 TEN1-204ENST00000588202 862 ntTSL 3 BASIC16.73■□□□□ 0.27
SPENQ96T58 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC16.73■□□□□ 0.27
SPENQ96T58 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC16.73■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms