Protein–RNA interactions for Protein: Q92922

SMARCC1, SWI/SNF complex subunit SMARCC1, humanhuman

Predicted RBP Predictions only

Length 1,105 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1Q92922 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC23.76■■□□□ 1.39
SMARCC1Q92922 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC23.75■■□□□ 1.39
SMARCC1Q92922 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
SMARCC1Q92922 Z98044.1-201ENST00000632503 1764 ntBASIC23.75■■□□□ 1.39
SMARCC1Q92922 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC23.75■■□□□ 1.39
SMARCC1Q92922 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
SMARCC1Q92922 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
SMARCC1Q92922 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
SMARCC1Q92922 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC23.75■■□□□ 1.39
SMARCC1Q92922 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
SMARCC1Q92922 AL137060.1-201ENST00000618151 2648 ntBASIC23.75■■□□□ 1.39
SMARCC1Q92922 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
SMARCC1Q92922 FP475955.4-201ENST00000623131 1990 ntBASIC23.75■■□□□ 1.39
SMARCC1Q92922 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC23.75■■□□□ 1.39
SMARCC1Q92922 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC23.75■■□□□ 1.39
SMARCC1Q92922 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC23.75■■□□□ 1.39
SMARCC1Q92922 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC23.75■■□□□ 1.39
SMARCC1Q92922 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC23.75■■□□□ 1.39
SMARCC1Q92922 KRT8P50-201ENST00000562022 1438 ntBASIC23.75■■□□□ 1.39
SMARCC1Q92922 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
SMARCC1Q92922 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
SMARCC1Q92922 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC23.75■■□□□ 1.39
SMARCC1Q92922 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
SMARCC1Q92922 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC23.74■■□□□ 1.39
SMARCC1Q92922 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC23.74■■□□□ 1.39
SMARCC1Q92922 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
SMARCC1Q92922 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC23.74■■□□□ 1.39
SMARCC1Q92922 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
SMARCC1Q92922 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
SMARCC1Q92922 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC23.74■■□□□ 1.39
SMARCC1Q92922 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC23.74■■□□□ 1.39
SMARCC1Q92922 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC23.74■■□□□ 1.39
SMARCC1Q92922 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC23.74■■□□□ 1.39
SMARCC1Q92922 AC092865.5-201ENST00000545435 363 ntBASIC23.74■■□□□ 1.39
SMARCC1Q92922 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC23.74■■□□□ 1.39
SMARCC1Q92922 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC23.74■■□□□ 1.39
SMARCC1Q92922 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC23.74■■□□□ 1.39
SMARCC1Q92922 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
SMARCC1Q92922 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC23.74■■□□□ 1.39
SMARCC1Q92922 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
SMARCC1Q92922 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC23.73■■□□□ 1.39
SMARCC1Q92922 MIR1233-2-201ENST00000408138 82 ntBASIC23.73■■□□□ 1.39
SMARCC1Q92922 MIR1233-1-201ENST00000408722 82 ntBASIC23.73■■□□□ 1.39
SMARCC1Q92922 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
SMARCC1Q92922 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC23.73■■□□□ 1.39
SMARCC1Q92922 THAP5-204ENST00000438865 868 ntTSL 2 BASIC23.73■■□□□ 1.39
SMARCC1Q92922 AC139887.3-201ENST00000568585 713 ntBASIC23.73■■□□□ 1.39
SMARCC1Q92922 PMS2P7-201ENST00000506558 1336 ntBASIC23.73■■□□□ 1.39
SMARCC1Q92922 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC23.73■■□□□ 1.39
SMARCC1Q92922 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC23.73■■□□□ 1.39
SMARCC1Q92922 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC23.73■■□□□ 1.39
SMARCC1Q92922 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC23.73■■□□□ 1.39
SMARCC1Q92922 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
SMARCC1Q92922 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC23.73■■□□□ 1.39
SMARCC1Q92922 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
SMARCC1Q92922 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
SMARCC1Q92922 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC23.73■■□□□ 1.39
SMARCC1Q92922 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC23.73■■□□□ 1.39
SMARCC1Q92922 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC23.73■■□□□ 1.39
SMARCC1Q92922 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC23.73■■□□□ 1.39
SMARCC1Q92922 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC23.72■■□□□ 1.39
SMARCC1Q92922 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
SMARCC1Q92922 POLD2P1-201ENST00000511220 997 ntBASIC23.72■■□□□ 1.39
SMARCC1Q92922 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC23.72■■□□□ 1.39
SMARCC1Q92922 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC23.72■■□□□ 1.39
SMARCC1Q92922 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC23.72■■□□□ 1.39
SMARCC1Q92922 AL355877.3-201ENST00000622820 899 ntBASIC23.72■■□□□ 1.39
SMARCC1Q92922 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC23.72■■□□□ 1.39
SMARCC1Q92922 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
SMARCC1Q92922 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC23.72■■□□□ 1.39
SMARCC1Q92922 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
SMARCC1Q92922 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC23.72■■□□□ 1.39
SMARCC1Q92922 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
SMARCC1Q92922 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC23.72■■□□□ 1.39
SMARCC1Q92922 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
SMARCC1Q92922 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
SMARCC1Q92922 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
SMARCC1Q92922 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC23.71■■□□□ 1.39
SMARCC1Q92922 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC23.71■■□□□ 1.39
SMARCC1Q92922 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC23.71■■□□□ 1.39
SMARCC1Q92922 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC23.71■■□□□ 1.39
SMARCC1Q92922 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
SMARCC1Q92922 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
SMARCC1Q92922 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC23.71■■□□□ 1.39
SMARCC1Q92922 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC23.71■■□□□ 1.39
SMARCC1Q92922 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC23.71■■□□□ 1.39
SMARCC1Q92922 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC23.71■■□□□ 1.39
SMARCC1Q92922 HIST2H3DP1-201ENST00000401004 416 ntBASIC23.71■■□□□ 1.39
SMARCC1Q92922 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC23.71■■□□□ 1.39
SMARCC1Q92922 LITAF-211ENST00000572255 516 ntTSL 4 BASIC23.71■■□□□ 1.39
SMARCC1Q92922 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC23.71■■□□□ 1.39
SMARCC1Q92922 TERC-201ENST00000602385 541 ntBASIC23.71■■□□□ 1.39
SMARCC1Q92922 AC112907.3-201ENST00000577781 2400 ntBASIC23.71■■□□□ 1.39
SMARCC1Q92922 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC23.7■■□□□ 1.39
SMARCC1Q92922 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC23.7■■□□□ 1.39
SMARCC1Q92922 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
SMARCC1Q92922 LINC01006-201ENST00000333319 2292 ntBASIC23.7■■□□□ 1.38
SMARCC1Q92922 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC23.7■■□□□ 1.38
SMARCC1Q92922 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
SMARCC1Q92922 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms