Protein–RNA interactions for Protein: Q8NEP7

KLHDC9, Kelch domain-containing protein 9, humanhuman

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC9Q8NEP7 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
KLHDC9Q8NEP7 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
KLHDC9Q8NEP7 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
KLHDC9Q8NEP7 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
KLHDC9Q8NEP7 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
KLHDC9Q8NEP7 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
KLHDC9Q8NEP7 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC20.5■□□□□ 0.87
KLHDC9Q8NEP7 KRT18P13-201ENST00000400056 1290 ntBASIC20.5■□□□□ 0.87
KLHDC9Q8NEP7 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
KLHDC9Q8NEP7 AC132008.2-207ENST00000454517 770 ntBASIC20.5■□□□□ 0.87
KLHDC9Q8NEP7 AF186996.4-201ENST00000467186 377 ntBASIC20.5■□□□□ 0.87
KLHDC9Q8NEP7 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC20.5■□□□□ 0.87
KLHDC9Q8NEP7 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC20.5■□□□□ 0.87
KLHDC9Q8NEP7 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC20.5■□□□□ 0.87
KLHDC9Q8NEP7 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC20.5■□□□□ 0.87
KLHDC9Q8NEP7 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
KLHDC9Q8NEP7 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
KLHDC9Q8NEP7 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
KLHDC9Q8NEP7 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC20.5■□□□□ 0.87
KLHDC9Q8NEP7 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC20.5■□□□□ 0.87
KLHDC9Q8NEP7 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
KLHDC9Q8NEP7 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
KLHDC9Q8NEP7 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
KLHDC9Q8NEP7 AC243591.1-201ENST00000452967 1364 ntBASIC20.49■□□□□ 0.87
KLHDC9Q8NEP7 LINC01521-201ENST00000504184 1943 ntBASIC20.49■□□□□ 0.87
KLHDC9Q8NEP7 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC20.49■□□□□ 0.87
KLHDC9Q8NEP7 AL163051.1-201ENST00000569214 1512 ntBASIC20.49■□□□□ 0.87
KLHDC9Q8NEP7 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
KLHDC9Q8NEP7 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
KLHDC9Q8NEP7 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
KLHDC9Q8NEP7 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC20.49■□□□□ 0.87
KLHDC9Q8NEP7 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC20.49■□□□□ 0.87
KLHDC9Q8NEP7 AC018712.1-201ENST00000455767 687 ntBASIC20.49■□□□□ 0.87
KLHDC9Q8NEP7 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
KLHDC9Q8NEP7 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC20.49■□□□□ 0.87
KLHDC9Q8NEP7 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
KLHDC9Q8NEP7 AC106730.1-201ENST00000566722 1090 ntBASIC20.49■□□□□ 0.87
KLHDC9Q8NEP7 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC20.49■□□□□ 0.87
KLHDC9Q8NEP7 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC20.49■□□□□ 0.87
KLHDC9Q8NEP7 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC20.49■□□□□ 0.87
KLHDC9Q8NEP7 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
KLHDC9Q8NEP7 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC20.49■□□□□ 0.87
KLHDC9Q8NEP7 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
KLHDC9Q8NEP7 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
KLHDC9Q8NEP7 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
KLHDC9Q8NEP7 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
KLHDC9Q8NEP7 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
KLHDC9Q8NEP7 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
KLHDC9Q8NEP7 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC20.48■□□□□ 0.87
KLHDC9Q8NEP7 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
KLHDC9Q8NEP7 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
KLHDC9Q8NEP7 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
KLHDC9Q8NEP7 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
KLHDC9Q8NEP7 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
KLHDC9Q8NEP7 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
KLHDC9Q8NEP7 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
KLHDC9Q8NEP7 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC20.48■□□□□ 0.87
KLHDC9Q8NEP7 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
KLHDC9Q8NEP7 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
KLHDC9Q8NEP7 DDT-203ENST00000403754 569 ntTSL 3 BASIC20.48■□□□□ 0.87
KLHDC9Q8NEP7 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC20.48■□□□□ 0.87
KLHDC9Q8NEP7 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC20.48■□□□□ 0.87
KLHDC9Q8NEP7 DDT-206ENST00000430101 573 ntTSL 2 BASIC20.48■□□□□ 0.87
KLHDC9Q8NEP7 RNPS1P1-201ENST00000507437 918 ntBASIC20.48■□□□□ 0.87
KLHDC9Q8NEP7 AC096582.2-201ENST00000510860 516 ntBASIC20.48■□□□□ 0.87
KLHDC9Q8NEP7 KRT18P58-201ENST00000527480 1120 ntBASIC20.48■□□□□ 0.87
KLHDC9Q8NEP7 IRF8-202ENST00000562492 946 ntTSL 3 BASIC20.48■□□□□ 0.87
KLHDC9Q8NEP7 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC20.48■□□□□ 0.87
KLHDC9Q8NEP7 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC20.48■□□□□ 0.87
KLHDC9Q8NEP7 AC008608.2-201ENST00000606089 416 ntBASIC20.48■□□□□ 0.87
KLHDC9Q8NEP7 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
KLHDC9Q8NEP7 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
KLHDC9Q8NEP7 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
KLHDC9Q8NEP7 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
KLHDC9Q8NEP7 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC20.48■□□□□ 0.87
KLHDC9Q8NEP7 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
KLHDC9Q8NEP7 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
KLHDC9Q8NEP7 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
KLHDC9Q8NEP7 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
KLHDC9Q8NEP7 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
KLHDC9Q8NEP7 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
KLHDC9Q8NEP7 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
KLHDC9Q8NEP7 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
KLHDC9Q8NEP7 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC20.47■□□□□ 0.87
KLHDC9Q8NEP7 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC20.47■□□□□ 0.87
KLHDC9Q8NEP7 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC20.47■□□□□ 0.87
KLHDC9Q8NEP7 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
KLHDC9Q8NEP7 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC20.47■□□□□ 0.87
KLHDC9Q8NEP7 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC20.47■□□□□ 0.87
KLHDC9Q8NEP7 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC20.47■□□□□ 0.87
KLHDC9Q8NEP7 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC20.47■□□□□ 0.87
KLHDC9Q8NEP7 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
KLHDC9Q8NEP7 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
KLHDC9Q8NEP7 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
KLHDC9Q8NEP7 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC20.47■□□□□ 0.87
KLHDC9Q8NEP7 HEIH-201ENST00000623091 1652 ntBASIC20.47■□□□□ 0.87
KLHDC9Q8NEP7 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC20.47■□□□□ 0.87
KLHDC9Q8NEP7 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
KLHDC9Q8NEP7 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
KLHDC9Q8NEP7 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms