Protein–RNA interactions for Protein: Q8N427

NME8, Thioredoxin domain-containing protein 3, humanhuman

Predictions only

Length 588 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NME8Q8N427 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
NME8Q8N427 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
NME8Q8N427 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
NME8Q8N427 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
NME8Q8N427 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
NME8Q8N427 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
NME8Q8N427 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC20.47■□□□□ 0.87
NME8Q8N427 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC20.47■□□□□ 0.87
NME8Q8N427 MIR3180-1-201ENST00000580374 94 ntBASIC20.47■□□□□ 0.87
NME8Q8N427 MIR3180-3-201ENST00000584616 94 ntBASIC20.47■□□□□ 0.87
NME8Q8N427 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC20.47■□□□□ 0.87
NME8Q8N427 LITAF-220ENST00000620789 692 ntTSL 5 BASIC20.47■□□□□ 0.87
NME8Q8N427 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
NME8Q8N427 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
NME8Q8N427 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC20.47■□□□□ 0.87
NME8Q8N427 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
NME8Q8N427 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
NME8Q8N427 CYP51A1P1-201ENST00000492267 1507 ntBASIC20.47■□□□□ 0.87
NME8Q8N427 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
NME8Q8N427 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
NME8Q8N427 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
NME8Q8N427 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
NME8Q8N427 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
NME8Q8N427 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
NME8Q8N427 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
NME8Q8N427 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
NME8Q8N427 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
NME8Q8N427 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC20.46■□□□□ 0.87
NME8Q8N427 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
NME8Q8N427 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC20.46■□□□□ 0.87
NME8Q8N427 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
NME8Q8N427 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
NME8Q8N427 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC20.46■□□□□ 0.87
NME8Q8N427 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
NME8Q8N427 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
NME8Q8N427 TSPY22P-201ENST00000427496 604 ntBASIC20.46■□□□□ 0.87
NME8Q8N427 CHCHD2P8-201ENST00000429873 447 ntBASIC20.46■□□□□ 0.87
NME8Q8N427 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC20.46■□□□□ 0.87
NME8Q8N427 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
NME8Q8N427 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
NME8Q8N427 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
NME8Q8N427 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC20.46■□□□□ 0.87
NME8Q8N427 MIR3652-201ENST00000579335 131 ntBASIC20.46■□□□□ 0.87
NME8Q8N427 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
NME8Q8N427 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
NME8Q8N427 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
NME8Q8N427 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
NME8Q8N427 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
NME8Q8N427 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
NME8Q8N427 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
NME8Q8N427 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
NME8Q8N427 AL032819.2-201ENST00000624543 2162 ntBASIC20.45■□□□□ 0.86
NME8Q8N427 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC20.45■□□□□ 0.86
NME8Q8N427 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
NME8Q8N427 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC20.45■□□□□ 0.86
NME8Q8N427 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC20.45■□□□□ 0.86
NME8Q8N427 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
NME8Q8N427 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
NME8Q8N427 AP002383.4-201ENST00000442518 975 ntBASIC20.45■□□□□ 0.86
NME8Q8N427 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC20.45■□□□□ 0.86
NME8Q8N427 PP7080-204ENST00000510714 601 ntTSL 3 BASIC20.45■□□□□ 0.86
NME8Q8N427 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC20.45■□□□□ 0.86
NME8Q8N427 AC009065.1-201ENST00000564055 1225 ntBASIC20.45■□□□□ 0.86
NME8Q8N427 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC20.45■□□□□ 0.86
NME8Q8N427 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC20.45■□□□□ 0.86
NME8Q8N427 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
NME8Q8N427 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC20.45■□□□□ 0.86
NME8Q8N427 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC20.45■□□□□ 0.86
NME8Q8N427 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
NME8Q8N427 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
NME8Q8N427 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC20.44■□□□□ 0.86
NME8Q8N427 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
NME8Q8N427 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC20.44■□□□□ 0.86
NME8Q8N427 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC20.44■□□□□ 0.86
NME8Q8N427 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
NME8Q8N427 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
NME8Q8N427 BAALC-202ENST00000306391 243 ntTSL 5 BASIC20.44■□□□□ 0.86
NME8Q8N427 BAALC-204ENST00000330955 222 ntTSL 5 BASIC20.44■□□□□ 0.86
NME8Q8N427 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
NME8Q8N427 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC20.44■□□□□ 0.86
NME8Q8N427 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC20.44■□□□□ 0.86
NME8Q8N427 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
NME8Q8N427 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC20.44■□□□□ 0.86
NME8Q8N427 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC20.44■□□□□ 0.86
NME8Q8N427 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
NME8Q8N427 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
NME8Q8N427 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC20.44■□□□□ 0.86
NME8Q8N427 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC20.44■□□□□ 0.86
NME8Q8N427 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
NME8Q8N427 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC20.43■□□□□ 0.86
NME8Q8N427 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
NME8Q8N427 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
NME8Q8N427 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
NME8Q8N427 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC20.43■□□□□ 0.86
NME8Q8N427 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
NME8Q8N427 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
NME8Q8N427 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
NME8Q8N427 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
NME8Q8N427 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC20.43■□□□□ 0.86
NME8Q8N427 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC20.43■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms