Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SUMO3P55854 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SUMO3P55854 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC16.85■□□□□ 0.29
SUMO3P55854 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC16.85■□□□□ 0.29
SUMO3P55854 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
SUMO3P55854 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC16.85■□□□□ 0.29
SUMO3P55854 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
SUMO3P55854 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SUMO3P55854 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC16.85■□□□□ 0.29
SUMO3P55854 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC16.85■□□□□ 0.29
SUMO3P55854 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC16.85■□□□□ 0.29
SUMO3P55854 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SUMO3P55854 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
SUMO3P55854 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
SUMO3P55854 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SUMO3P55854 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC16.85■□□□□ 0.29
SUMO3P55854 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC16.85■□□□□ 0.29
SUMO3P55854 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
SUMO3P55854 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SUMO3P55854 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SUMO3P55854 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC16.84■□□□□ 0.29
SUMO3P55854 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SUMO3P55854 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SUMO3P55854 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
SUMO3P55854 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SUMO3P55854 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SUMO3P55854 Telomerase-vert.1-201ENST00000363312 438 ntBASIC16.84■□□□□ 0.29
SUMO3P55854 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SUMO3P55854 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC16.84■□□□□ 0.29
SUMO3P55854 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC16.84■□□□□ 0.29
SUMO3P55854 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC16.84■□□□□ 0.29
SUMO3P55854 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC16.84■□□□□ 0.29
SUMO3P55854 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC16.84■□□□□ 0.29
SUMO3P55854 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SUMO3P55854 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
SUMO3P55854 AC092865.7-201ENST00000641832 219 ntBASIC16.84■□□□□ 0.29
SUMO3P55854 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SUMO3P55854 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
SUMO3P55854 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC16.84■□□□□ 0.29
SUMO3P55854 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SUMO3P55854 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC16.84■□□□□ 0.29
SUMO3P55854 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC16.84■□□□□ 0.29
SUMO3P55854 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC16.84■□□□□ 0.29
SUMO3P55854 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC16.84■□□□□ 0.29
SUMO3P55854 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SUMO3P55854 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
SUMO3P55854 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SUMO3P55854 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC16.84■□□□□ 0.29
SUMO3P55854 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
SUMO3P55854 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
SUMO3P55854 AL499627.1-201ENST00000569373 2188 ntBASIC16.84■□□□□ 0.29
SUMO3P55854 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC16.84■□□□□ 0.29
SUMO3P55854 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.29
SUMO3P55854 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
SUMO3P55854 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC16.83■□□□□ 0.28
SUMO3P55854 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SUMO3P55854 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
SUMO3P55854 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
SUMO3P55854 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
SUMO3P55854 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SUMO3P55854 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SUMO3P55854 MIR149-201ENST00000384879 89 ntBASIC16.83■□□□□ 0.28
SUMO3P55854 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
SUMO3P55854 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC16.83■□□□□ 0.28
SUMO3P55854 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC16.83■□□□□ 0.28
SUMO3P55854 BX664615.1-201ENST00000443558 458 ntBASIC16.83■□□□□ 0.28
SUMO3P55854 SEC1P-202ENST00000473944 940 ntBASIC16.83■□□□□ 0.28
SUMO3P55854 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
SUMO3P55854 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
SUMO3P55854 PPOX-219ENST00000544598 813 ntTSL 2 BASIC16.83■□□□□ 0.28
SUMO3P55854 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
SUMO3P55854 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC16.83■□□□□ 0.28
SUMO3P55854 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SUMO3P55854 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
SUMO3P55854 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC16.83■□□□□ 0.28
SUMO3P55854 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC16.83■□□□□ 0.28
SUMO3P55854 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
SUMO3P55854 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SUMO3P55854 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SUMO3P55854 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC16.82■□□□□ 0.28
SUMO3P55854 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC16.82■□□□□ 0.28
SUMO3P55854 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SUMO3P55854 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SUMO3P55854 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SUMO3P55854 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
SUMO3P55854 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC16.82■□□□□ 0.28
SUMO3P55854 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
SUMO3P55854 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC16.82■□□□□ 0.28
SUMO3P55854 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC16.82■□□□□ 0.28
SUMO3P55854 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SUMO3P55854 AL163051.1-201ENST00000569214 1512 ntBASIC16.82■□□□□ 0.28
SUMO3P55854 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC16.82■□□□□ 0.28
SUMO3P55854 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
SUMO3P55854 AC073508.3-201ENST00000619697 1419 ntBASIC16.82■□□□□ 0.28
SUMO3P55854 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC16.82■□□□□ 0.28
SUMO3P55854 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SUMO3P55854 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SUMO3P55854 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
SUMO3P55854 ANKRD20A18P-201ENST00000359341 492 ntBASIC16.82■□□□□ 0.28
SUMO3P55854 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms