Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
HCFC1P51610 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HCFC1P51610 AC034236.2-201ENST00000606662 1610 ntBASIC16.2■□□□□ 0.18
HCFC1P51610 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
HCFC1P51610 PBK-203ENST00000522944 1499 ntTSL 2 BASIC16.2■□□□□ 0.18
HCFC1P51610 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HCFC1P51610 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC16.2■□□□□ 0.18
HCFC1P51610 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
HCFC1P51610 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
HCFC1P51610 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HCFC1P51610 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
HCFC1P51610 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HCFC1P51610 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC16.2■□□□□ 0.18
HCFC1P51610 AP003733.1-201ENST00000491725 852 ntBASIC16.2■□□□□ 0.18
HCFC1P51610 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC16.2■□□□□ 0.18
HCFC1P51610 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HCFC1P51610 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
HCFC1P51610 AC124864.1-201ENST00000623408 392 ntBASIC16.2■□□□□ 0.18
HCFC1P51610 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC16.2■□□□□ 0.18
HCFC1P51610 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC16.2■□□□□ 0.18
HCFC1P51610 NSUN5P1-202ENST00000421140 1535 ntBASIC16.2■□□□□ 0.18
HCFC1P51610 NSUN5P2-203ENST00000457352 1529 ntBASIC16.2■□□□□ 0.18
HCFC1P51610 CYP51A1P1-201ENST00000492267 1507 ntBASIC16.2■□□□□ 0.18
HCFC1P51610 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
HCFC1P51610 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HCFC1P51610 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HCFC1P51610 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HCFC1P51610 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC16.2■□□□□ 0.18
HCFC1P51610 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC16.19■□□□□ 0.18
HCFC1P51610 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HCFC1P51610 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
HCFC1P51610 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC16.19■□□□□ 0.18
HCFC1P51610 AF238378.1-201ENST00000526806 358 ntBASIC16.19■□□□□ 0.18
HCFC1P51610 PPOX-214ENST00000535223 664 ntTSL 3 BASIC16.19■□□□□ 0.18
HCFC1P51610 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC16.19■□□□□ 0.18
HCFC1P51610 AC024563.2-201ENST00000603282 481 ntBASIC16.19■□□□□ 0.18
HCFC1P51610 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC16.19■□□□□ 0.18
HCFC1P51610 GPALPP1-207ENST00000611650 899 ntBASIC16.19■□□□□ 0.18
HCFC1P51610 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
HCFC1P51610 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC16.19■□□□□ 0.18
HCFC1P51610 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HCFC1P51610 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HCFC1P51610 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
HCFC1P51610 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
HCFC1P51610 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
HCFC1P51610 KRT89P-201ENST00000620027 1478 ntBASIC16.19■□□□□ 0.18
HCFC1P51610 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC16.19■□□□□ 0.18
HCFC1P51610 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
HCFC1P51610 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
HCFC1P51610 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC16.19■□□□□ 0.18
HCFC1P51610 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HCFC1P51610 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
HCFC1P51610 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HCFC1P51610 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
HCFC1P51610 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HCFC1P51610 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
HCFC1P51610 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HCFC1P51610 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HCFC1P51610 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HCFC1P51610 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.19■□□□□ 0.18
HCFC1P51610 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC16.19■□□□□ 0.18
HCFC1P51610 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC16.19■□□□□ 0.18
HCFC1P51610 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HCFC1P51610 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
HCFC1P51610 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC16.19■□□□□ 0.18
HCFC1P51610 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC16.19■□□□□ 0.18
HCFC1P51610 AP001005.1-201ENST00000571755 1248 ntBASIC16.19■□□□□ 0.18
HCFC1P51610 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC16.19■□□□□ 0.18
HCFC1P51610 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
HCFC1P51610 NME4-212ENST00000621774 904 ntTSL 3 BASIC16.19■□□□□ 0.18
HCFC1P51610 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
HCFC1P51610 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC16.19■□□□□ 0.18
HCFC1P51610 POLI-202ENST00000406285 2030 ntTSL 2 BASIC16.19■□□□□ 0.18
HCFC1P51610 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
HCFC1P51610 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC16.19■□□□□ 0.18
HCFC1P51610 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HCFC1P51610 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
HCFC1P51610 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
HCFC1P51610 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
HCFC1P51610 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
HCFC1P51610 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC16.18■□□□□ 0.18
HCFC1P51610 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC16.18■□□□□ 0.18
HCFC1P51610 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
HCFC1P51610 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC16.18■□□□□ 0.18
HCFC1P51610 VENTXP7-201ENST00000475503 772 ntBASIC16.18■□□□□ 0.18
HCFC1P51610 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
HCFC1P51610 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
HCFC1P51610 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
HCFC1P51610 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
HCFC1P51610 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
HCFC1P51610 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
HCFC1P51610 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
HCFC1P51610 AC116562.4-201ENST00000641316 2276 ntBASIC16.18■□□□□ 0.18
HCFC1P51610 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
HCFC1P51610 AP005901.3-202ENST00000581653 237 ntBASIC16.18■□□□□ 0.18
HCFC1P51610 AL353801.3-201ENST00000609898 542 ntBASIC16.18■□□□□ 0.18
HCFC1P51610 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC16.18■□□□□ 0.18
HCFC1P51610 BX640515.1-201ENST00000617215 977 ntBASIC16.18■□□□□ 0.18
HCFC1P51610 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC16.17■□□□□ 0.18
HCFC1P51610 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 61.4 ms