Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
COL4A5P29400 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
COL4A5P29400 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
COL4A5P29400 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC22.31■■□□□ 1.16
COL4A5P29400 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
COL4A5P29400 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC22.31■■□□□ 1.16
COL4A5P29400 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC22.31■■□□□ 1.16
COL4A5P29400 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
COL4A5P29400 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC22.31■■□□□ 1.16
COL4A5P29400 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC22.31■■□□□ 1.16
COL4A5P29400 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC22.31■■□□□ 1.16
COL4A5P29400 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC22.31■■□□□ 1.16
COL4A5P29400 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
COL4A5P29400 DDT-203ENST00000403754 569 ntTSL 3 BASIC22.31■■□□□ 1.16
COL4A5P29400 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC22.31■■□□□ 1.16
COL4A5P29400 AC093909.1-201ENST00000504731 1122 ntBASIC22.31■■□□□ 1.16
COL4A5P29400 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC22.31■■□□□ 1.16
COL4A5P29400 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC22.31■■□□□ 1.16
COL4A5P29400 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC22.31■■□□□ 1.16
COL4A5P29400 AL691403.2-201ENST00000618460 490 ntBASIC22.31■■□□□ 1.16
COL4A5P29400 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
COL4A5P29400 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC22.31■■□□□ 1.16
COL4A5P29400 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
COL4A5P29400 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC22.31■■□□□ 1.16
COL4A5P29400 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
COL4A5P29400 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC22.31■■□□□ 1.16
COL4A5P29400 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
COL4A5P29400 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
COL4A5P29400 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
COL4A5P29400 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC22.3■■□□□ 1.16
COL4A5P29400 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
COL4A5P29400 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
COL4A5P29400 NMU-202ENST00000505262 693 ntTSL 3 BASIC22.3■■□□□ 1.16
COL4A5P29400 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
COL4A5P29400 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC22.3■■□□□ 1.16
COL4A5P29400 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC22.3■■□□□ 1.16
COL4A5P29400 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC22.3■■□□□ 1.16
COL4A5P29400 GZMM-202ENST00000592501 941 ntTSL 3 BASIC22.3■■□□□ 1.16
COL4A5P29400 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
COL4A5P29400 NARF-204ENST00000390006 1766 ntTSL 2 BASIC22.3■■□□□ 1.16
COL4A5P29400 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC22.3■■□□□ 1.16
COL4A5P29400 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
COL4A5P29400 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC22.3■■□□□ 1.16
COL4A5P29400 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC22.3■■□□□ 1.16
COL4A5P29400 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC22.3■■□□□ 1.16
COL4A5P29400 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
COL4A5P29400 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC22.3■■□□□ 1.16
COL4A5P29400 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC22.3■■□□□ 1.16
COL4A5P29400 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
COL4A5P29400 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC22.3■■□□□ 1.16
COL4A5P29400 RBM17P3-201ENST00000417687 1192 ntBASIC22.3■■□□□ 1.16
COL4A5P29400 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC22.3■■□□□ 1.16
COL4A5P29400 SART3-203ENST00000546611 1184 ntBASIC22.3■■□□□ 1.16
COL4A5P29400 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC22.3■■□□□ 1.16
COL4A5P29400 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
COL4A5P29400 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC22.29■■□□□ 1.16
COL4A5P29400 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC22.29■■□□□ 1.16
COL4A5P29400 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
COL4A5P29400 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC22.29■■□□□ 1.16
COL4A5P29400 AC104109.2-201ENST00000602919 1418 ntBASIC22.29■■□□□ 1.16
COL4A5P29400 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
COL4A5P29400 PAN3-AS1-201ENST00000563843 1351 ntBASIC22.29■■□□□ 1.16
COL4A5P29400 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC22.29■■□□□ 1.16
COL4A5P29400 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
COL4A5P29400 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC22.29■■□□□ 1.16
COL4A5P29400 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC22.29■■□□□ 1.16
COL4A5P29400 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC22.29■■□□□ 1.16
COL4A5P29400 GGCT-205ENST00000409436 954 ntTSL 3 BASIC22.29■■□□□ 1.16
COL4A5P29400 CD63-204ENST00000546939 779 ntTSL 3 BASIC22.29■■□□□ 1.16
COL4A5P29400 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC22.29■■□□□ 1.16
COL4A5P29400 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC22.29■■□□□ 1.16
COL4A5P29400 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC22.29■■□□□ 1.16
COL4A5P29400 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC22.29■■□□□ 1.16
COL4A5P29400 TP73-AS1-210ENST00000637775 1455 ntBASIC22.29■■□□□ 1.16
COL4A5P29400 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC22.28■■□□□ 1.16
COL4A5P29400 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC22.28■■□□□ 1.16
COL4A5P29400 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
COL4A5P29400 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
COL4A5P29400 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC22.28■■□□□ 1.16
COL4A5P29400 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
COL4A5P29400 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
COL4A5P29400 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC22.28■■□□□ 1.16
COL4A5P29400 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
COL4A5P29400 MEG3-211ENST00000452514 461 ntTSL 3 BASIC22.28■■□□□ 1.16
COL4A5P29400 AC021087.4-201ENST00000563761 564 ntBASIC22.28■■□□□ 1.16
COL4A5P29400 MTDHP3-201ENST00000594186 672 ntBASIC22.28■■□□□ 1.16
COL4A5P29400 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC22.28■■□□□ 1.16
COL4A5P29400 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
COL4A5P29400 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
COL4A5P29400 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
COL4A5P29400 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
COL4A5P29400 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
COL4A5P29400 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC22.27■■□□□ 1.16
COL4A5P29400 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC22.27■■□□□ 1.16
COL4A5P29400 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC22.27■■□□□ 1.16
COL4A5P29400 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
COL4A5P29400 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC22.27■■□□□ 1.16
COL4A5P29400 LBH-204ENST00000406087 559 ntTSL 4 BASIC22.27■■□□□ 1.16
COL4A5P29400 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC22.27■■□□□ 1.16
COL4A5P29400 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC22.27■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms