Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC16.84■□□□□ 0.29
SPTA1P02549 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SPTA1P02549 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
SPTA1P02549 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC16.84■□□□□ 0.29
SPTA1P02549 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SPTA1P02549 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC16.84■□□□□ 0.29
SPTA1P02549 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SPTA1P02549 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SPTA1P02549 YBX2P1-201ENST00000394192 760 ntBASIC16.84■□□□□ 0.29
SPTA1P02549 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC16.84■□□□□ 0.29
SPTA1P02549 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC16.84■□□□□ 0.29
SPTA1P02549 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SPTA1P02549 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC16.84■□□□□ 0.29
SPTA1P02549 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SPTA1P02549 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
SPTA1P02549 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
SPTA1P02549 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC16.83■□□□□ 0.29
SPTA1P02549 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.29
SPTA1P02549 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
SPTA1P02549 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC16.83■□□□□ 0.28
SPTA1P02549 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SPTA1P02549 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SPTA1P02549 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SPTA1P02549 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SPTA1P02549 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
SPTA1P02549 AC073314.1-201ENST00000568729 2216 ntBASIC16.83■□□□□ 0.28
SPTA1P02549 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
SPTA1P02549 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC16.83■□□□□ 0.28
SPTA1P02549 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
SPTA1P02549 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC16.83■□□□□ 0.28
SPTA1P02549 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
SPTA1P02549 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
SPTA1P02549 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SPTA1P02549 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SPTA1P02549 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
SPTA1P02549 AL353692.3-201ENST00000407031 1396 ntBASIC16.82■□□□□ 0.28
SPTA1P02549 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SPTA1P02549 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC16.82■□□□□ 0.28
SPTA1P02549 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC16.82■□□□□ 0.28
SPTA1P02549 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC16.82■□□□□ 0.28
SPTA1P02549 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC16.82■□□□□ 0.28
SPTA1P02549 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC16.82■□□□□ 0.28
SPTA1P02549 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC16.82■□□□□ 0.28
SPTA1P02549 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
SPTA1P02549 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
SPTA1P02549 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC16.82■□□□□ 0.28
SPTA1P02549 GPX1P2-201ENST00000429271 606 ntBASIC16.82■□□□□ 0.28
SPTA1P02549 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC16.82■□□□□ 0.28
SPTA1P02549 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC16.82■□□□□ 0.28
SPTA1P02549 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC16.82■□□□□ 0.28
SPTA1P02549 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC16.82■□□□□ 0.28
SPTA1P02549 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
SPTA1P02549 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
SPTA1P02549 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SPTA1P02549 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
SPTA1P02549 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC16.82■□□□□ 0.28
SPTA1P02549 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
SPTA1P02549 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
SPTA1P02549 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SPTA1P02549 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
SPTA1P02549 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SPTA1P02549 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SPTA1P02549 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC16.81■□□□□ 0.28
SPTA1P02549 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SPTA1P02549 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC16.81■□□□□ 0.28
SPTA1P02549 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SPTA1P02549 DDT-203ENST00000403754 569 ntTSL 3 BASIC16.81■□□□□ 0.28
SPTA1P02549 DDT-206ENST00000430101 573 ntTSL 2 BASIC16.81■□□□□ 0.28
SPTA1P02549 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC16.81■□□□□ 0.28
SPTA1P02549 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC16.81■□□□□ 0.28
SPTA1P02549 AC124864.1-201ENST00000623408 392 ntBASIC16.81■□□□□ 0.28
SPTA1P02549 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
SPTA1P02549 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC16.81■□□□□ 0.28
SPTA1P02549 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC16.81■□□□□ 0.28
SPTA1P02549 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC16.81■□□□□ 0.28
SPTA1P02549 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
SPTA1P02549 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SPTA1P02549 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SPTA1P02549 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SPTA1P02549 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
SPTA1P02549 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
SPTA1P02549 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SPTA1P02549 IMP4-203ENST00000409935 958 ntTSL 5 BASIC16.81■□□□□ 0.28
SPTA1P02549 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC16.81■□□□□ 0.28
SPTA1P02549 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC16.81■□□□□ 0.28
SPTA1P02549 MIR3180-4-201ENST00000582223 153 ntBASIC16.81■□□□□ 0.28
SPTA1P02549 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC16.81■□□□□ 0.28
SPTA1P02549 GPR32P1-201ENST00000601788 811 ntBASIC16.81■□□□□ 0.28
SPTA1P02549 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SPTA1P02549 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SPTA1P02549 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC16.81■□□□□ 0.28
SPTA1P02549 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC16.81■□□□□ 0.28
SPTA1P02549 KRT89P-201ENST00000620027 1478 ntBASIC16.81■□□□□ 0.28
SPTA1P02549 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SPTA1P02549 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
SPTA1P02549 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SPTA1P02549 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
SPTA1P02549 GUSBP12-201ENST00000513727 720 ntBASIC16.8■□□□□ 0.28
SPTA1P02549 RFPL4AP1-201ENST00000530883 850 ntBASIC16.8■□□□□ 0.28
SPTA1P02549 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms