Protein–RNA interactions for Protein: A0A0B4J2F2

LOC102724428, SNF1-like kinase, isoform CRA_a, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LOC102724428A0A0B4J2F2 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
LOC102724428A0A0B4J2F2 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
LOC102724428A0A0B4J2F2 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC23.65■■□□□ 1.38
LOC102724428A0A0B4J2F2 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
LOC102724428A0A0B4J2F2 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
LOC102724428A0A0B4J2F2 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC23.64■■□□□ 1.38
LOC102724428A0A0B4J2F2 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
LOC102724428A0A0B4J2F2 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
LOC102724428A0A0B4J2F2 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC23.64■■□□□ 1.38
LOC102724428A0A0B4J2F2 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
LOC102724428A0A0B4J2F2 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
LOC102724428A0A0B4J2F2 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC23.64■■□□□ 1.37
LOC102724428A0A0B4J2F2 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
LOC102724428A0A0B4J2F2 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC23.64■■□□□ 1.37
LOC102724428A0A0B4J2F2 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC23.64■■□□□ 1.37
LOC102724428A0A0B4J2F2 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
LOC102724428A0A0B4J2F2 RPL18-209ENST00000550645 463 ntTSL 5 BASIC23.64■■□□□ 1.37
LOC102724428A0A0B4J2F2 RPL18-214ENST00000552588 559 ntTSL 3 BASIC23.64■■□□□ 1.37
LOC102724428A0A0B4J2F2 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC23.64■■□□□ 1.37
LOC102724428A0A0B4J2F2 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC23.64■■□□□ 1.37
LOC102724428A0A0B4J2F2 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC23.64■■□□□ 1.37
LOC102724428A0A0B4J2F2 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
LOC102724428A0A0B4J2F2 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC23.64■■□□□ 1.37
LOC102724428A0A0B4J2F2 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC23.64■■□□□ 1.37
LOC102724428A0A0B4J2F2 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
LOC102724428A0A0B4J2F2 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC23.63■■□□□ 1.37
LOC102724428A0A0B4J2F2 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
LOC102724428A0A0B4J2F2 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC23.63■■□□□ 1.37
LOC102724428A0A0B4J2F2 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
LOC102724428A0A0B4J2F2 CCS-201ENST00000310190 942 ntTSL 5 BASIC23.63■■□□□ 1.37
LOC102724428A0A0B4J2F2 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC23.63■■□□□ 1.37
LOC102724428A0A0B4J2F2 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC23.63■■□□□ 1.37
LOC102724428A0A0B4J2F2 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC23.63■■□□□ 1.37
LOC102724428A0A0B4J2F2 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC23.63■■□□□ 1.37
LOC102724428A0A0B4J2F2 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC23.63■■□□□ 1.37
LOC102724428A0A0B4J2F2 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC23.63■■□□□ 1.37
LOC102724428A0A0B4J2F2 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC23.63■■□□□ 1.37
LOC102724428A0A0B4J2F2 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC23.63■■□□□ 1.37
LOC102724428A0A0B4J2F2 AC141586.3-201ENST00000562166 1838 ntBASIC23.63■■□□□ 1.37
LOC102724428A0A0B4J2F2 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
LOC102724428A0A0B4J2F2 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC23.63■■□□□ 1.37
LOC102724428A0A0B4J2F2 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC23.63■■□□□ 1.37
LOC102724428A0A0B4J2F2 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC23.63■■□□□ 1.37
LOC102724428A0A0B4J2F2 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
LOC102724428A0A0B4J2F2 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC23.62■■□□□ 1.37
LOC102724428A0A0B4J2F2 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC23.62■■□□□ 1.37
LOC102724428A0A0B4J2F2 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC23.62■■□□□ 1.37
LOC102724428A0A0B4J2F2 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC23.62■■□□□ 1.37
LOC102724428A0A0B4J2F2 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC23.62■■□□□ 1.37
LOC102724428A0A0B4J2F2 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC23.62■■□□□ 1.37
LOC102724428A0A0B4J2F2 MIR1233-2-201ENST00000408138 82 ntBASIC23.62■■□□□ 1.37
LOC102724428A0A0B4J2F2 MIR1233-1-201ENST00000408722 82 ntBASIC23.62■■□□□ 1.37
LOC102724428A0A0B4J2F2 THAP5-204ENST00000438865 868 ntTSL 2 BASIC23.62■■□□□ 1.37
LOC102724428A0A0B4J2F2 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC23.62■■□□□ 1.37
LOC102724428A0A0B4J2F2 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC23.62■■□□□ 1.37
LOC102724428A0A0B4J2F2 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC23.62■■□□□ 1.37
LOC102724428A0A0B4J2F2 AL355877.3-201ENST00000622820 899 ntBASIC23.62■■□□□ 1.37
LOC102724428A0A0B4J2F2 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
LOC102724428A0A0B4J2F2 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC23.62■■□□□ 1.37
LOC102724428A0A0B4J2F2 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
LOC102724428A0A0B4J2F2 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
LOC102724428A0A0B4J2F2 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC23.62■■□□□ 1.37
LOC102724428A0A0B4J2F2 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC23.62■■□□□ 1.37
LOC102724428A0A0B4J2F2 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
LOC102724428A0A0B4J2F2 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC23.61■■□□□ 1.37
LOC102724428A0A0B4J2F2 AL163051.1-201ENST00000569214 1512 ntBASIC23.61■■□□□ 1.37
LOC102724428A0A0B4J2F2 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
LOC102724428A0A0B4J2F2 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
LOC102724428A0A0B4J2F2 RCN1P2-201ENST00000398357 915 ntBASIC23.61■■□□□ 1.37
LOC102724428A0A0B4J2F2 DDT-203ENST00000403754 569 ntTSL 3 BASIC23.61■■□□□ 1.37
LOC102724428A0A0B4J2F2 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
LOC102724428A0A0B4J2F2 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC23.61■■□□□ 1.37
LOC102724428A0A0B4J2F2 DDT-206ENST00000430101 573 ntTSL 2 BASIC23.61■■□□□ 1.37
LOC102724428A0A0B4J2F2 RPL13AP23-201ENST00000480739 586 ntBASIC23.61■■□□□ 1.37
LOC102724428A0A0B4J2F2 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC23.61■■□□□ 1.37
LOC102724428A0A0B4J2F2 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
LOC102724428A0A0B4J2F2 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC23.61■■□□□ 1.37
LOC102724428A0A0B4J2F2 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC23.61■■□□□ 1.37
LOC102724428A0A0B4J2F2 AC139887.3-201ENST00000568585 713 ntBASIC23.61■■□□□ 1.37
LOC102724428A0A0B4J2F2 LITAF-211ENST00000572255 516 ntTSL 4 BASIC23.61■■□□□ 1.37
LOC102724428A0A0B4J2F2 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC23.61■■□□□ 1.37
LOC102724428A0A0B4J2F2 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
LOC102724428A0A0B4J2F2 FAM215A-202ENST00000632077 792 ntBASIC23.61■■□□□ 1.37
LOC102724428A0A0B4J2F2 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
LOC102724428A0A0B4J2F2 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
LOC102724428A0A0B4J2F2 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
LOC102724428A0A0B4J2F2 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC23.61■■□□□ 1.37
LOC102724428A0A0B4J2F2 PMS2P7-201ENST00000506558 1336 ntBASIC23.6■■□□□ 1.37
LOC102724428A0A0B4J2F2 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC23.6■■□□□ 1.37
LOC102724428A0A0B4J2F2 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC23.6■■□□□ 1.37
LOC102724428A0A0B4J2F2 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC23.6■■□□□ 1.37
LOC102724428A0A0B4J2F2 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
LOC102724428A0A0B4J2F2 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
LOC102724428A0A0B4J2F2 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
LOC102724428A0A0B4J2F2 FABP5-202ENST00000396359 986 ntTSL 5 BASIC23.6■■□□□ 1.37
LOC102724428A0A0B4J2F2 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC23.6■■□□□ 1.37
LOC102724428A0A0B4J2F2 FGFR3P6-201ENST00000457012 610 ntBASIC23.6■■□□□ 1.37
LOC102724428A0A0B4J2F2 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC23.6■■□□□ 1.37
LOC102724428A0A0B4J2F2 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC23.6■■□□□ 1.37
LOC102724428A0A0B4J2F2 AC005336.2-201ENST00000593183 939 ntBASIC23.6■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms