Protein–RNA interactions for Protein: Q9Y2J0

RPH3A, Rabphilin-3A, humanhuman

Predicted RBP Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3AQ9Y2J0 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC17.09■□□□□ 0.33
RPH3AQ9Y2J0 LETM1P2-201ENST00000597330 2178 ntBASIC17.09■□□□□ 0.33
RPH3AQ9Y2J0 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
RPH3AQ9Y2J0 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC17.09■□□□□ 0.33
RPH3AQ9Y2J0 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RPH3AQ9Y2J0 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RPH3AQ9Y2J0 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
RPH3AQ9Y2J0 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
RPH3AQ9Y2J0 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
RPH3AQ9Y2J0 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
RPH3AQ9Y2J0 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC17.08■□□□□ 0.33
RPH3AQ9Y2J0 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
RPH3AQ9Y2J0 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
RPH3AQ9Y2J0 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC17.08■□□□□ 0.33
RPH3AQ9Y2J0 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
RPH3AQ9Y2J0 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC17.08■□□□□ 0.33
RPH3AQ9Y2J0 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC17.08■□□□□ 0.33
RPH3AQ9Y2J0 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
RPH3AQ9Y2J0 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RPH3AQ9Y2J0 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC17.08■□□□□ 0.32
RPH3AQ9Y2J0 KRT8P45-201ENST00000414328 1447 ntBASIC17.08■□□□□ 0.32
RPH3AQ9Y2J0 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
RPH3AQ9Y2J0 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC17.08■□□□□ 0.32
RPH3AQ9Y2J0 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RPH3AQ9Y2J0 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
RPH3AQ9Y2J0 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RPH3AQ9Y2J0 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
RPH3AQ9Y2J0 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
RPH3AQ9Y2J0 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC17.08■□□□□ 0.32
RPH3AQ9Y2J0 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC17.08■□□□□ 0.32
RPH3AQ9Y2J0 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC17.08■□□□□ 0.32
RPH3AQ9Y2J0 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC17.08■□□□□ 0.32
RPH3AQ9Y2J0 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC17.08■□□□□ 0.32
RPH3AQ9Y2J0 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC17.08■□□□□ 0.32
RPH3AQ9Y2J0 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC17.08■□□□□ 0.32
RPH3AQ9Y2J0 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
RPH3AQ9Y2J0 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
RPH3AQ9Y2J0 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC17.08■□□□□ 0.32
RPH3AQ9Y2J0 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
RPH3AQ9Y2J0 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC17.08■□□□□ 0.32
RPH3AQ9Y2J0 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
RPH3AQ9Y2J0 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
RPH3AQ9Y2J0 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RPH3AQ9Y2J0 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
RPH3AQ9Y2J0 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
RPH3AQ9Y2J0 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
RPH3AQ9Y2J0 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
RPH3AQ9Y2J0 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
RPH3AQ9Y2J0 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RPH3AQ9Y2J0 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RPH3AQ9Y2J0 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
RPH3AQ9Y2J0 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
RPH3AQ9Y2J0 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC17.07■□□□□ 0.32
RPH3AQ9Y2J0 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
RPH3AQ9Y2J0 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RPH3AQ9Y2J0 CFL2-205ENST00000555765 632 ntTSL 2 BASIC17.07■□□□□ 0.32
RPH3AQ9Y2J0 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
RPH3AQ9Y2J0 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
RPH3AQ9Y2J0 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
RPH3AQ9Y2J0 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RPH3AQ9Y2J0 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC17.07■□□□□ 0.32
RPH3AQ9Y2J0 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RPH3AQ9Y2J0 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
RPH3AQ9Y2J0 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RPH3AQ9Y2J0 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RPH3AQ9Y2J0 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RPH3AQ9Y2J0 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RPH3AQ9Y2J0 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
RPH3AQ9Y2J0 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC17.06■□□□□ 0.32
RPH3AQ9Y2J0 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
RPH3AQ9Y2J0 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RPH3AQ9Y2J0 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
RPH3AQ9Y2J0 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC17.06■□□□□ 0.32
RPH3AQ9Y2J0 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
RPH3AQ9Y2J0 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RPH3AQ9Y2J0 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RPH3AQ9Y2J0 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RPH3AQ9Y2J0 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RPH3AQ9Y2J0 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RPH3AQ9Y2J0 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RPH3AQ9Y2J0 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC17.06■□□□□ 0.32
RPH3AQ9Y2J0 AL023284.2-201ENST00000405850 579 ntBASIC17.06■□□□□ 0.32
RPH3AQ9Y2J0 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC17.06■□□□□ 0.32
RPH3AQ9Y2J0 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC17.06■□□□□ 0.32
RPH3AQ9Y2J0 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC17.06■□□□□ 0.32
RPH3AQ9Y2J0 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC17.06■□□□□ 0.32
RPH3AQ9Y2J0 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
RPH3AQ9Y2J0 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
RPH3AQ9Y2J0 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RPH3AQ9Y2J0 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RPH3AQ9Y2J0 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RPH3AQ9Y2J0 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RPH3AQ9Y2J0 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RPH3AQ9Y2J0 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RPH3AQ9Y2J0 AL512353.2-201ENST00000448759 1962 ntBASIC17.06■□□□□ 0.32
RPH3AQ9Y2J0 RCC2P3-201ENST00000418112 1537 ntBASIC17.06■□□□□ 0.32
RPH3AQ9Y2J0 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
RPH3AQ9Y2J0 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC17.06■□□□□ 0.32
RPH3AQ9Y2J0 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RPH3AQ9Y2J0 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC17.05■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms