Protein–RNA interactions for Protein: Q9P2X8

LINC00474, Putative uncharacterized protein encoded by LINC00474, humanhuman

Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00474Q9P2X8 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
LINC00474Q9P2X8 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
LINC00474Q9P2X8 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
LINC00474Q9P2X8 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC12.17□□□□□ -0.46
LINC00474Q9P2X8 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
LINC00474Q9P2X8 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
LINC00474Q9P2X8 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC12.17□□□□□ -0.46
LINC00474Q9P2X8 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
LINC00474Q9P2X8 AC096733.2-201ENST00000609937 1394 ntBASIC12.17□□□□□ -0.46
LINC00474Q9P2X8 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
LINC00474Q9P2X8 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
LINC00474Q9P2X8 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
LINC00474Q9P2X8 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
LINC00474Q9P2X8 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
LINC00474Q9P2X8 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC12.16□□□□□ -0.46
LINC00474Q9P2X8 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
LINC00474Q9P2X8 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
LINC00474Q9P2X8 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC12.16□□□□□ -0.46
LINC00474Q9P2X8 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
LINC00474Q9P2X8 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
LINC00474Q9P2X8 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
LINC00474Q9P2X8 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC12.16□□□□□ -0.46
LINC00474Q9P2X8 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
LINC00474Q9P2X8 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
LINC00474Q9P2X8 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC12.16□□□□□ -0.46
LINC00474Q9P2X8 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
LINC00474Q9P2X8 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
LINC00474Q9P2X8 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
LINC00474Q9P2X8 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
LINC00474Q9P2X8 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
LINC00474Q9P2X8 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
LINC00474Q9P2X8 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
LINC00474Q9P2X8 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
LINC00474Q9P2X8 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
LINC00474Q9P2X8 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
LINC00474Q9P2X8 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC12.16□□□□□ -0.46
LINC00474Q9P2X8 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
LINC00474Q9P2X8 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
LINC00474Q9P2X8 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
LINC00474Q9P2X8 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
LINC00474Q9P2X8 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC12.16□□□□□ -0.46
LINC00474Q9P2X8 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
LINC00474Q9P2X8 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC12.16□□□□□ -0.46
LINC00474Q9P2X8 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC12.16□□□□□ -0.46
LINC00474Q9P2X8 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC12.16□□□□□ -0.46
LINC00474Q9P2X8 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC12.16□□□□□ -0.46
LINC00474Q9P2X8 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC12.16□□□□□ -0.46
LINC00474Q9P2X8 REXO2-216ENST00000544196 452 ntTSL 3 BASIC12.16□□□□□ -0.46
LINC00474Q9P2X8 CKBP1-201ENST00000565489 1086 ntBASIC12.16□□□□□ -0.46
LINC00474Q9P2X8 C2orf69P3-201ENST00000565542 1120 ntBASIC12.16□□□□□ -0.46
LINC00474Q9P2X8 SLC25A1P4-201ENST00000567977 778 ntBASIC12.16□□□□□ -0.46
LINC00474Q9P2X8 AP005242.2-201ENST00000580065 1175 ntBASIC12.16□□□□□ -0.46
LINC00474Q9P2X8 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC12.16□□□□□ -0.46
LINC00474Q9P2X8 REXO1L10P-201ENST00000615707 1290 ntBASIC12.16□□□□□ -0.46
LINC00474Q9P2X8 REXO1L12P-201ENST00000622156 912 ntBASIC12.16□□□□□ -0.46
LINC00474Q9P2X8 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
LINC00474Q9P2X8 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
LINC00474Q9P2X8 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
LINC00474Q9P2X8 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
LINC00474Q9P2X8 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
LINC00474Q9P2X8 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
LINC00474Q9P2X8 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
LINC00474Q9P2X8 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC12.16□□□□□ -0.46
LINC00474Q9P2X8 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC12.16□□□□□ -0.46
LINC00474Q9P2X8 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
LINC00474Q9P2X8 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC12.16□□□□□ -0.46
LINC00474Q9P2X8 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
LINC00474Q9P2X8 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
LINC00474Q9P2X8 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
LINC00474Q9P2X8 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC12.15□□□□□ -0.46
LINC00474Q9P2X8 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
LINC00474Q9P2X8 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
LINC00474Q9P2X8 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC12.15□□□□□ -0.46
LINC00474Q9P2X8 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
LINC00474Q9P2X8 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
LINC00474Q9P2X8 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
LINC00474Q9P2X8 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
LINC00474Q9P2X8 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
LINC00474Q9P2X8 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC12.15□□□□□ -0.46
LINC00474Q9P2X8 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC12.15□□□□□ -0.46
LINC00474Q9P2X8 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
LINC00474Q9P2X8 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
LINC00474Q9P2X8 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
LINC00474Q9P2X8 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
LINC00474Q9P2X8 SLC25A1P2-201ENST00000430693 912 ntBASIC12.15□□□□□ -0.46
LINC00474Q9P2X8 TSPY23P-201ENST00000440136 739 ntBASIC12.15□□□□□ -0.46
LINC00474Q9P2X8 CCR12P-201ENST00000446203 998 ntBASIC12.15□□□□□ -0.46
LINC00474Q9P2X8 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC12.15□□□□□ -0.46
LINC00474Q9P2X8 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
LINC00474Q9P2X8 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
LINC00474Q9P2X8 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
LINC00474Q9P2X8 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC12.15□□□□□ -0.46
LINC00474Q9P2X8 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
LINC00474Q9P2X8 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC12.15□□□□□ -0.46
LINC00474Q9P2X8 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC12.15□□□□□ -0.46
LINC00474Q9P2X8 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
LINC00474Q9P2X8 AC066615.1-201ENST00000640911 628 ntBASIC12.15□□□□□ -0.46
LINC00474Q9P2X8 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
LINC00474Q9P2X8 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
LINC00474Q9P2X8 IRX1P1-201ENST00000438849 1838 ntBASIC12.15□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms