Protein–RNA interactions for Protein: Q96EP0

RNF31, E3 ubiquitin-protein ligase RNF31, humanhuman

Predictions only

Length 1,072 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF31Q96EP0 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
RNF31Q96EP0 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RNF31Q96EP0 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RNF31Q96EP0 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RNF31Q96EP0 TP73-202ENST00000354437 2140 ntTSL 5 BASIC17.98■□□□□ 0.47
RNF31Q96EP0 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
RNF31Q96EP0 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
RNF31Q96EP0 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
RNF31Q96EP0 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC17.98■□□□□ 0.47
RNF31Q96EP0 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC17.97■□□□□ 0.47
RNF31Q96EP0 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
RNF31Q96EP0 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
RNF31Q96EP0 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
RNF31Q96EP0 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC17.97■□□□□ 0.47
RNF31Q96EP0 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
RNF31Q96EP0 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RNF31Q96EP0 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RNF31Q96EP0 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC17.97■□□□□ 0.47
RNF31Q96EP0 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RNF31Q96EP0 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC17.97■□□□□ 0.47
RNF31Q96EP0 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
RNF31Q96EP0 AC092597.1-201ENST00000487352 616 ntBASIC17.97■□□□□ 0.47
RNF31Q96EP0 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC17.97■□□□□ 0.47
RNF31Q96EP0 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
RNF31Q96EP0 VENTXP5-201ENST00000523979 775 ntBASIC17.97■□□□□ 0.47
RNF31Q96EP0 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC17.97■□□□□ 0.47
RNF31Q96EP0 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC17.97■□□□□ 0.47
RNF31Q96EP0 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC17.97■□□□□ 0.47
RNF31Q96EP0 AC012313.10-201ENST00000623509 926 ntBASIC17.97■□□□□ 0.47
RNF31Q96EP0 AP000550.4-202ENST00000639755 178 ntBASIC17.97■□□□□ 0.47
RNF31Q96EP0 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC17.97■□□□□ 0.47
RNF31Q96EP0 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
RNF31Q96EP0 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RNF31Q96EP0 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
RNF31Q96EP0 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
RNF31Q96EP0 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
RNF31Q96EP0 NEFHP1-201ENST00000412845 2629 ntBASIC17.97■□□□□ 0.47
RNF31Q96EP0 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RNF31Q96EP0 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RNF31Q96EP0 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
RNF31Q96EP0 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RNF31Q96EP0 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RNF31Q96EP0 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RNF31Q96EP0 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
RNF31Q96EP0 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RNF31Q96EP0 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC17.96■□□□□ 0.47
RNF31Q96EP0 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC17.96■□□□□ 0.47
RNF31Q96EP0 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
RNF31Q96EP0 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
RNF31Q96EP0 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
RNF31Q96EP0 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RNF31Q96EP0 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
RNF31Q96EP0 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC17.96■□□□□ 0.47
RNF31Q96EP0 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
RNF31Q96EP0 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC17.96■□□□□ 0.47
RNF31Q96EP0 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
RNF31Q96EP0 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC17.96■□□□□ 0.47
RNF31Q96EP0 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC17.96■□□□□ 0.47
RNF31Q96EP0 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RNF31Q96EP0 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RNF31Q96EP0 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RNF31Q96EP0 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
RNF31Q96EP0 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
RNF31Q96EP0 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RNF31Q96EP0 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.46
RNF31Q96EP0 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC17.96■□□□□ 0.46
RNF31Q96EP0 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RNF31Q96EP0 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RNF31Q96EP0 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RNF31Q96EP0 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RNF31Q96EP0 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC17.95■□□□□ 0.46
RNF31Q96EP0 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RNF31Q96EP0 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC17.95■□□□□ 0.46
RNF31Q96EP0 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
RNF31Q96EP0 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
RNF31Q96EP0 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RNF31Q96EP0 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RNF31Q96EP0 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RNF31Q96EP0 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RNF31Q96EP0 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC17.95■□□□□ 0.46
RNF31Q96EP0 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC17.95■□□□□ 0.46
RNF31Q96EP0 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC17.95■□□□□ 0.46
RNF31Q96EP0 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RNF31Q96EP0 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
RNF31Q96EP0 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RNF31Q96EP0 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RNF31Q96EP0 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RNF31Q96EP0 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC17.95■□□□□ 0.46
RNF31Q96EP0 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RNF31Q96EP0 HOMER2P1-201ENST00000455653 964 ntBASIC17.95■□□□□ 0.46
RNF31Q96EP0 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RNF31Q96EP0 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC17.95■□□□□ 0.46
RNF31Q96EP0 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
RNF31Q96EP0 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
RNF31Q96EP0 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RNF31Q96EP0 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RNF31Q96EP0 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC17.95■□□□□ 0.46
RNF31Q96EP0 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RNF31Q96EP0 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC17.95■□□□□ 0.46
RNF31Q96EP0 GAS2L1P1-201ENST00000420145 1480 ntBASIC17.95■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms