Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC20.2■□□□□ 0.82
TRIM43Q96BQ3 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
TRIM43Q96BQ3 Z82202.1-201ENST00000623446 1880 ntBASIC20.2■□□□□ 0.82
TRIM43Q96BQ3 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TRIM43Q96BQ3 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
TRIM43Q96BQ3 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC20.2■□□□□ 0.82
TRIM43Q96BQ3 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TRIM43Q96BQ3 RPS2P28-201ENST00000314255 741 ntBASIC20.2■□□□□ 0.82
TRIM43Q96BQ3 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TRIM43Q96BQ3 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC20.2■□□□□ 0.82
TRIM43Q96BQ3 RBM17P3-201ENST00000417687 1192 ntBASIC20.2■□□□□ 0.82
TRIM43Q96BQ3 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC20.2■□□□□ 0.82
TRIM43Q96BQ3 RPS8P6-201ENST00000426177 609 ntBASIC20.2■□□□□ 0.82
TRIM43Q96BQ3 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC20.2■□□□□ 0.82
TRIM43Q96BQ3 NMU-202ENST00000505262 693 ntTSL 3 BASIC20.2■□□□□ 0.82
TRIM43Q96BQ3 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
TRIM43Q96BQ3 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC20.2■□□□□ 0.82
TRIM43Q96BQ3 PAM16-208ENST00000573553 722 ntTSL 2 BASIC20.2■□□□□ 0.82
TRIM43Q96BQ3 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC20.2■□□□□ 0.82
TRIM43Q96BQ3 AP001269.4-201ENST00000609611 512 ntBASIC20.2■□□□□ 0.82
TRIM43Q96BQ3 FAM197Y3-203ENST00000618346 717 ntBASIC20.2■□□□□ 0.82
TRIM43Q96BQ3 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC20.2■□□□□ 0.82
TRIM43Q96BQ3 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
TRIM43Q96BQ3 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
TRIM43Q96BQ3 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC20.2■□□□□ 0.82
TRIM43Q96BQ3 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC20.2■□□□□ 0.82
TRIM43Q96BQ3 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC20.2■□□□□ 0.82
TRIM43Q96BQ3 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
TRIM43Q96BQ3 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC20.19■□□□□ 0.82
TRIM43Q96BQ3 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC20.19■□□□□ 0.82
TRIM43Q96BQ3 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
TRIM43Q96BQ3 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
TRIM43Q96BQ3 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC20.19■□□□□ 0.82
TRIM43Q96BQ3 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TRIM43Q96BQ3 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
TRIM43Q96BQ3 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TRIM43Q96BQ3 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC20.19■□□□□ 0.82
TRIM43Q96BQ3 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TRIM43Q96BQ3 MED15P5-201ENST00000423150 992 ntBASIC20.19■□□□□ 0.82
TRIM43Q96BQ3 GPX1P2-201ENST00000429271 606 ntBASIC20.19■□□□□ 0.82
TRIM43Q96BQ3 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC20.19■□□□□ 0.82
TRIM43Q96BQ3 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC20.19■□□□□ 0.82
TRIM43Q96BQ3 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC20.19■□□□□ 0.82
TRIM43Q96BQ3 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC20.19■□□□□ 0.82
TRIM43Q96BQ3 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC20.19■□□□□ 0.82
TRIM43Q96BQ3 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
TRIM43Q96BQ3 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
TRIM43Q96BQ3 TCF3P1-201ENST00000423021 1937 ntBASIC20.19■□□□□ 0.82
TRIM43Q96BQ3 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TRIM43Q96BQ3 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
TRIM43Q96BQ3 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
TRIM43Q96BQ3 TP73-AS1-210ENST00000637775 1455 ntBASIC20.18■□□□□ 0.82
TRIM43Q96BQ3 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
TRIM43Q96BQ3 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
TRIM43Q96BQ3 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
TRIM43Q96BQ3 LBH-204ENST00000406087 559 ntTSL 4 BASIC20.18■□□□□ 0.82
TRIM43Q96BQ3 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC20.18■□□□□ 0.82
TRIM43Q96BQ3 FIS1-203ENST00000442303 631 ntTSL 3 BASIC20.18■□□□□ 0.82
TRIM43Q96BQ3 URGCP-206ENST00000446958 365 ntTSL 2 BASIC20.18■□□□□ 0.82
TRIM43Q96BQ3 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC20.18■□□□□ 0.82
TRIM43Q96BQ3 AC112482.1-201ENST00000492080 688 ntBASIC20.18■□□□□ 0.82
TRIM43Q96BQ3 AC034105.1-201ENST00000563488 319 ntBASIC20.18■□□□□ 0.82
TRIM43Q96BQ3 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
TRIM43Q96BQ3 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC20.18■□□□□ 0.82
TRIM43Q96BQ3 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TRIM43Q96BQ3 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC20.18■□□□□ 0.82
TRIM43Q96BQ3 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
TRIM43Q96BQ3 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TRIM43Q96BQ3 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
TRIM43Q96BQ3 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TRIM43Q96BQ3 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
TRIM43Q96BQ3 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TRIM43Q96BQ3 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
TRIM43Q96BQ3 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC20.17■□□□□ 0.82
TRIM43Q96BQ3 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC20.17■□□□□ 0.82
TRIM43Q96BQ3 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
TRIM43Q96BQ3 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TRIM43Q96BQ3 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TRIM43Q96BQ3 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TRIM43Q96BQ3 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
TRIM43Q96BQ3 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
TRIM43Q96BQ3 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TRIM43Q96BQ3 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TRIM43Q96BQ3 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TRIM43Q96BQ3 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TRIM43Q96BQ3 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC20.17■□□□□ 0.82
TRIM43Q96BQ3 IMP4-203ENST00000409935 958 ntTSL 5 BASIC20.17■□□□□ 0.82
TRIM43Q96BQ3 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC20.17■□□□□ 0.82
TRIM43Q96BQ3 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TRIM43Q96BQ3 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
TRIM43Q96BQ3 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC20.17■□□□□ 0.82
TRIM43Q96BQ3 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
TRIM43Q96BQ3 AC005336.2-201ENST00000593183 939 ntBASIC20.17■□□□□ 0.82
TRIM43Q96BQ3 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC20.17■□□□□ 0.82
TRIM43Q96BQ3 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC20.17■□□□□ 0.82
TRIM43Q96BQ3 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
TRIM43Q96BQ3 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
TRIM43Q96BQ3 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
TRIM43Q96BQ3 GABARAPL3-202ENST00000624044 1851 ntBASIC20.17■□□□□ 0.82
TRIM43Q96BQ3 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC20.17■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms