Protein–RNA interactions for Protein: Q8NFU1

BEST2, Bestrophin-2, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST2Q8NFU1 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
BEST2Q8NFU1 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC20.05■□□□□ 0.8
BEST2Q8NFU1 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC20.05■□□□□ 0.8
BEST2Q8NFU1 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC20.05■□□□□ 0.8
BEST2Q8NFU1 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
BEST2Q8NFU1 MIR3917-201ENST00000580971 93 ntBASIC20.05■□□□□ 0.8
BEST2Q8NFU1 AC091076.1-201ENST00000610741 619 ntBASIC20.05■□□□□ 0.8
BEST2Q8NFU1 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
BEST2Q8NFU1 AL358472.4-201ENST00000633140 710 ntBASIC20.05■□□□□ 0.8
BEST2Q8NFU1 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC20.05■□□□□ 0.8
BEST2Q8NFU1 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
BEST2Q8NFU1 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
BEST2Q8NFU1 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC20.05■□□□□ 0.8
BEST2Q8NFU1 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
BEST2Q8NFU1 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC20.05■□□□□ 0.8
BEST2Q8NFU1 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
BEST2Q8NFU1 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC20.05■□□□□ 0.8
BEST2Q8NFU1 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
BEST2Q8NFU1 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC20.05■□□□□ 0.8
BEST2Q8NFU1 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
BEST2Q8NFU1 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC20.04■□□□□ 0.8
BEST2Q8NFU1 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
BEST2Q8NFU1 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC20.04■□□□□ 0.8
BEST2Q8NFU1 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
BEST2Q8NFU1 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
BEST2Q8NFU1 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
BEST2Q8NFU1 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
BEST2Q8NFU1 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
BEST2Q8NFU1 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC20.04■□□□□ 0.8
BEST2Q8NFU1 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC20.04■□□□□ 0.8
BEST2Q8NFU1 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
BEST2Q8NFU1 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC20.04■□□□□ 0.8
BEST2Q8NFU1 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC20.04■□□□□ 0.8
BEST2Q8NFU1 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
BEST2Q8NFU1 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
BEST2Q8NFU1 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC20.04■□□□□ 0.8
BEST2Q8NFU1 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
BEST2Q8NFU1 AC010240.3-201ENST00000607688 395 ntBASIC20.04■□□□□ 0.8
BEST2Q8NFU1 AL121956.5-201ENST00000625261 221 ntBASIC20.04■□□□□ 0.8
BEST2Q8NFU1 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
BEST2Q8NFU1 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
BEST2Q8NFU1 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
BEST2Q8NFU1 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
BEST2Q8NFU1 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
BEST2Q8NFU1 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
BEST2Q8NFU1 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC20.03■□□□□ 0.8
BEST2Q8NFU1 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
BEST2Q8NFU1 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
BEST2Q8NFU1 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC20.03■□□□□ 0.8
BEST2Q8NFU1 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
BEST2Q8NFU1 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
BEST2Q8NFU1 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC20.03■□□□□ 0.8
BEST2Q8NFU1 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC20.03■□□□□ 0.8
BEST2Q8NFU1 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
BEST2Q8NFU1 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC20.03■□□□□ 0.8
BEST2Q8NFU1 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC20.03■□□□□ 0.8
BEST2Q8NFU1 FGF14-AS2-201ENST00000606448 1074 ntBASIC20.03■□□□□ 0.8
BEST2Q8NFU1 AL157888.1-201ENST00000631930 593 ntBASIC20.03■□□□□ 0.8
BEST2Q8NFU1 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
BEST2Q8NFU1 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
BEST2Q8NFU1 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
BEST2Q8NFU1 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
BEST2Q8NFU1 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
BEST2Q8NFU1 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
BEST2Q8NFU1 CYP51A1P1-201ENST00000492267 1507 ntBASIC20.02■□□□□ 0.8
BEST2Q8NFU1 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
BEST2Q8NFU1 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
BEST2Q8NFU1 FAM86EP-206ENST00000510506 987 ntBASIC20.02■□□□□ 0.8
BEST2Q8NFU1 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC20.02■□□□□ 0.8
BEST2Q8NFU1 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
BEST2Q8NFU1 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
BEST2Q8NFU1 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
BEST2Q8NFU1 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
BEST2Q8NFU1 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC20.02■□□□□ 0.8
BEST2Q8NFU1 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
BEST2Q8NFU1 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
BEST2Q8NFU1 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
BEST2Q8NFU1 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC20.02■□□□□ 0.79
BEST2Q8NFU1 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC20.02■□□□□ 0.79
BEST2Q8NFU1 LINC01311-201ENST00000565162 1445 ntBASIC20.02■□□□□ 0.79
BEST2Q8NFU1 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC20.01■□□□□ 0.79
BEST2Q8NFU1 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
BEST2Q8NFU1 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
BEST2Q8NFU1 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
BEST2Q8NFU1 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC20.01■□□□□ 0.79
BEST2Q8NFU1 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
BEST2Q8NFU1 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
BEST2Q8NFU1 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
BEST2Q8NFU1 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
BEST2Q8NFU1 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
BEST2Q8NFU1 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
BEST2Q8NFU1 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
BEST2Q8NFU1 DAP-202ENST00000432074 1048 ntTSL 2 BASIC20.01■□□□□ 0.79
BEST2Q8NFU1 KRT18P41-201ENST00000518924 1277 ntBASIC20.01■□□□□ 0.79
BEST2Q8NFU1 LY6E-213ENST00000522528 606 ntTSL 3 BASIC20.01■□□□□ 0.79
BEST2Q8NFU1 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC20.01■□□□□ 0.79
BEST2Q8NFU1 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC20.01■□□□□ 0.79
BEST2Q8NFU1 MIR3180-4-201ENST00000582223 153 ntBASIC20.01■□□□□ 0.79
BEST2Q8NFU1 NAT14-202ENST00000587400 416 ntTSL 5 BASIC20.01■□□□□ 0.79
BEST2Q8NFU1 HYMAI.1-201ENST00000620949 238 ntBASIC20.01■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms