Protein–RNA interactions for Protein: Q6ZMV5

PPP4R3CP, Putative SMEK homolog 3, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3CPQ6ZMV5 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC21.53■■□□□ 1.04
PPP4R3CPQ6ZMV5 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
PPP4R3CPQ6ZMV5 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
PPP4R3CPQ6ZMV5 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
PPP4R3CPQ6ZMV5 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
PPP4R3CPQ6ZMV5 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
PPP4R3CPQ6ZMV5 TMEM176B-201ENST00000326442 1129 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
PPP4R3CPQ6ZMV5 CETN4P-201ENST00000432407 469 ntBASIC21.52■■□□□ 1.04
PPP4R3CPQ6ZMV5 SMAD9-IT1-201ENST00000437983 504 ntTSL 3 BASIC21.52■■□□□ 1.04
PPP4R3CPQ6ZMV5 PENK-204ENST00000518770 863 ntTSL 2 BASIC21.52■■□□□ 1.04
PPP4R3CPQ6ZMV5 RERGL-203ENST00000538724 973 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
PPP4R3CPQ6ZMV5 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC21.52■■□□□ 1.04
PPP4R3CPQ6ZMV5 AC018362.2-202ENST00000567089 562 ntTSL 3 BASIC21.52■■□□□ 1.04
PPP4R3CPQ6ZMV5 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC21.52■■□□□ 1.04
PPP4R3CPQ6ZMV5 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC21.52■■□□□ 1.04
PPP4R3CPQ6ZMV5 AC245884.10-201ENST00000597355 337 ntBASIC21.52■■□□□ 1.04
PPP4R3CPQ6ZMV5 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
PPP4R3CPQ6ZMV5 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
PPP4R3CPQ6ZMV5 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
PPP4R3CPQ6ZMV5 TP73-202ENST00000354437 2140 ntTSL 5 BASIC21.52■■□□□ 1.03
PPP4R3CPQ6ZMV5 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC21.52■■□□□ 1.03
PPP4R3CPQ6ZMV5 STAMBP-204ENST00000409707 1649 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
PPP4R3CPQ6ZMV5 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
PPP4R3CPQ6ZMV5 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PPP4R3CPQ6ZMV5 OR5AQ1P-202ENST00000641257 1534 ntBASIC21.51■■□□□ 1.03
PPP4R3CPQ6ZMV5 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
PPP4R3CPQ6ZMV5 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC21.51■■□□□ 1.03
PPP4R3CPQ6ZMV5 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
PPP4R3CPQ6ZMV5 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC21.51■■□□□ 1.03
PPP4R3CPQ6ZMV5 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PPP4R3CPQ6ZMV5 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
PPP4R3CPQ6ZMV5 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC21.51■■□□□ 1.03
PPP4R3CPQ6ZMV5 AL445190.1-201ENST00000416448 288 ntTSL 5 BASIC21.51■■□□□ 1.03
PPP4R3CPQ6ZMV5 NIFKP9-201ENST00000419265 221 ntBASIC21.51■■□□□ 1.03
PPP4R3CPQ6ZMV5 TUBB8P6-201ENST00000436895 1288 ntBASIC21.51■■□□□ 1.03
PPP4R3CPQ6ZMV5 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
PPP4R3CPQ6ZMV5 DHDH-203ENST00000522614 776 ntTSL 5 BASIC21.51■■□□□ 1.03
PPP4R3CPQ6ZMV5 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
PPP4R3CPQ6ZMV5 CALM1-205ENST00000553542 877 ntTSL 5 BASIC21.51■■□□□ 1.03
PPP4R3CPQ6ZMV5 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC21.51■■□□□ 1.03
PPP4R3CPQ6ZMV5 AC074051.4-201ENST00000564888 892 ntBASIC21.51■■□□□ 1.03
PPP4R3CPQ6ZMV5 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC21.51■■□□□ 1.03
PPP4R3CPQ6ZMV5 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC21.51■■□□□ 1.03
PPP4R3CPQ6ZMV5 MIR4785-201ENST00000585005 73 ntBASIC21.51■■□□□ 1.03
PPP4R3CPQ6ZMV5 OR13Z2P-201ENST00000606338 555 ntBASIC21.51■■□□□ 1.03
PPP4R3CPQ6ZMV5 AP003400.5-201ENST00000624827 617 ntBASIC21.51■■□□□ 1.03
PPP4R3CPQ6ZMV5 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC21.51■■□□□ 1.03
PPP4R3CPQ6ZMV5 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC21.51■■□□□ 1.03
PPP4R3CPQ6ZMV5 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
PPP4R3CPQ6ZMV5 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
PPP4R3CPQ6ZMV5 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PPP4R3CPQ6ZMV5 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PPP4R3CPQ6ZMV5 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
PPP4R3CPQ6ZMV5 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC21.51■■□□□ 1.03
PPP4R3CPQ6ZMV5 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
PPP4R3CPQ6ZMV5 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
PPP4R3CPQ6ZMV5 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
PPP4R3CPQ6ZMV5 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
PPP4R3CPQ6ZMV5 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
PPP4R3CPQ6ZMV5 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PPP4R3CPQ6ZMV5 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC21.5■■□□□ 1.03
PPP4R3CPQ6ZMV5 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC21.5■■□□□ 1.03
PPP4R3CPQ6ZMV5 AP002982.1-201ENST00000492365 877 ntBASIC21.5■■□□□ 1.03
PPP4R3CPQ6ZMV5 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
PPP4R3CPQ6ZMV5 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC21.5■■□□□ 1.03
PPP4R3CPQ6ZMV5 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC21.5■■□□□ 1.03
PPP4R3CPQ6ZMV5 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC21.5■■□□□ 1.03
PPP4R3CPQ6ZMV5 AL133507.1-201ENST00000605269 557 ntBASIC21.5■■□□□ 1.03
PPP4R3CPQ6ZMV5 AC009974.1-201ENST00000608881 455 ntBASIC21.5■■□□□ 1.03
PPP4R3CPQ6ZMV5 AC079414.3-201ENST00000612986 1090 ntBASIC21.5■■□□□ 1.03
PPP4R3CPQ6ZMV5 AC026585.1-201ENST00000619582 524 ntBASIC21.5■■□□□ 1.03
PPP4R3CPQ6ZMV5 AC026422.1-201ENST00000623961 452 ntBASIC21.5■■□□□ 1.03
PPP4R3CPQ6ZMV5 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PPP4R3CPQ6ZMV5 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC21.5■■□□□ 1.03
PPP4R3CPQ6ZMV5 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
PPP4R3CPQ6ZMV5 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC21.5■■□□□ 1.03
PPP4R3CPQ6ZMV5 RABGGTB-201ENST00000319942 1496 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PPP4R3CPQ6ZMV5 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
PPP4R3CPQ6ZMV5 CDCA7-203ENST00000410019 1488 ntTSL 2 BASIC21.5■■□□□ 1.03
PPP4R3CPQ6ZMV5 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC21.5■■□□□ 1.03
PPP4R3CPQ6ZMV5 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
PPP4R3CPQ6ZMV5 KRT17P2-201ENST00000300992 1314 ntBASIC21.5■■□□□ 1.03
PPP4R3CPQ6ZMV5 SRI-203ENST00000419179 1307 ntTSL 2 BASIC21.5■■□□□ 1.03
PPP4R3CPQ6ZMV5 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
PPP4R3CPQ6ZMV5 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC21.5■■□□□ 1.03
PPP4R3CPQ6ZMV5 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PPP4R3CPQ6ZMV5 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PPP4R3CPQ6ZMV5 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC21.49■■□□□ 1.03
PPP4R3CPQ6ZMV5 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC21.49■■□□□ 1.03
PPP4R3CPQ6ZMV5 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
PPP4R3CPQ6ZMV5 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
PPP4R3CPQ6ZMV5 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC21.49■■□□□ 1.03
PPP4R3CPQ6ZMV5 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
PPP4R3CPQ6ZMV5 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PPP4R3CPQ6ZMV5 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC21.49■■□□□ 1.03
PPP4R3CPQ6ZMV5 MORF4L1P7-201ENST00000426038 703 ntBASIC21.49■■□□□ 1.03
PPP4R3CPQ6ZMV5 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC21.49■■□□□ 1.03
PPP4R3CPQ6ZMV5 MTND1P22-201ENST00000510572 951 ntBASIC21.49■■□□□ 1.03
PPP4R3CPQ6ZMV5 AC104123.1-203ENST00000513158 575 ntTSL 3 BASIC21.49■■□□□ 1.03
PPP4R3CPQ6ZMV5 AL117351.2-201ENST00000513571 157 ntBASIC21.49■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms