Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
LYSMD4Q5XG99 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LYSMD4Q5XG99 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
LYSMD4Q5XG99 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
LYSMD4Q5XG99 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
LYSMD4Q5XG99 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
LYSMD4Q5XG99 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC18.27■□□□□ 0.52
LYSMD4Q5XG99 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC18.27■□□□□ 0.52
LYSMD4Q5XG99 RPP21-221ENST00000428040 594 ntTSL 2 BASIC18.27■□□□□ 0.52
LYSMD4Q5XG99 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
LYSMD4Q5XG99 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC18.27■□□□□ 0.52
LYSMD4Q5XG99 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC18.27■□□□□ 0.52
LYSMD4Q5XG99 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC18.27■□□□□ 0.52
LYSMD4Q5XG99 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC18.27■□□□□ 0.52
LYSMD4Q5XG99 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC18.27■□□□□ 0.52
LYSMD4Q5XG99 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
LYSMD4Q5XG99 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
LYSMD4Q5XG99 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
LYSMD4Q5XG99 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.51
LYSMD4Q5XG99 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
LYSMD4Q5XG99 LINC01006-201ENST00000333319 2292 ntBASIC18.26■□□□□ 0.51
LYSMD4Q5XG99 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC18.26■□□□□ 0.51
LYSMD4Q5XG99 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
LYSMD4Q5XG99 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
LYSMD4Q5XG99 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC18.26■□□□□ 0.51
LYSMD4Q5XG99 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC18.26■□□□□ 0.51
LYSMD4Q5XG99 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LYSMD4Q5XG99 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
LYSMD4Q5XG99 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
LYSMD4Q5XG99 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC18.26■□□□□ 0.51
LYSMD4Q5XG99 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC18.26■□□□□ 0.51
LYSMD4Q5XG99 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
LYSMD4Q5XG99 AL591684.3-201ENST00000605187 298 ntBASIC18.26■□□□□ 0.51
LYSMD4Q5XG99 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC18.26■□□□□ 0.51
LYSMD4Q5XG99 AC139530.3-201ENST00000620344 690 ntBASIC18.26■□□□□ 0.51
LYSMD4Q5XG99 ABBA01031661.1-201ENST00000634362 1253 ntBASIC18.26■□□□□ 0.51
LYSMD4Q5XG99 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC18.26■□□□□ 0.51
LYSMD4Q5XG99 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
LYSMD4Q5XG99 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
LYSMD4Q5XG99 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LYSMD4Q5XG99 IRX1P1-201ENST00000438849 1838 ntBASIC18.26■□□□□ 0.51
LYSMD4Q5XG99 UBQLN4P1-201ENST00000461599 1801 ntBASIC18.26■□□□□ 0.51
LYSMD4Q5XG99 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC18.26■□□□□ 0.51
LYSMD4Q5XG99 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
LYSMD4Q5XG99 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
LYSMD4Q5XG99 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC18.25■□□□□ 0.51
LYSMD4Q5XG99 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
LYSMD4Q5XG99 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
LYSMD4Q5XG99 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC18.25■□□□□ 0.51
LYSMD4Q5XG99 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC18.25■□□□□ 0.51
LYSMD4Q5XG99 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
LYSMD4Q5XG99 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
LYSMD4Q5XG99 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
LYSMD4Q5XG99 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
LYSMD4Q5XG99 EMD-201ENST00000369835 966 ntTSL 3 BASIC18.25■□□□□ 0.51
LYSMD4Q5XG99 MIR574-201ENST00000385209 96 ntBASIC18.25■□□□□ 0.51
LYSMD4Q5XG99 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
LYSMD4Q5XG99 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
LYSMD4Q5XG99 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
LYSMD4Q5XG99 AF186996.4-201ENST00000467186 377 ntBASIC18.25■□□□□ 0.51
LYSMD4Q5XG99 IRF8-202ENST00000562492 946 ntTSL 3 BASIC18.25■□□□□ 0.51
LYSMD4Q5XG99 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
LYSMD4Q5XG99 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
LYSMD4Q5XG99 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
LYSMD4Q5XG99 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
LYSMD4Q5XG99 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
LYSMD4Q5XG99 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
LYSMD4Q5XG99 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC18.25■□□□□ 0.51
LYSMD4Q5XG99 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
LYSMD4Q5XG99 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
LYSMD4Q5XG99 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
LYSMD4Q5XG99 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
LYSMD4Q5XG99 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LYSMD4Q5XG99 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC18.24■□□□□ 0.51
LYSMD4Q5XG99 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC18.24■□□□□ 0.51
LYSMD4Q5XG99 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LYSMD4Q5XG99 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LYSMD4Q5XG99 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LYSMD4Q5XG99 MED22-202ENST00000371999 987 ntTSL 3 BASIC18.24■□□□□ 0.51
LYSMD4Q5XG99 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LYSMD4Q5XG99 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
LYSMD4Q5XG99 AL031284.1-201ENST00000419297 478 ntBASIC18.24■□□□□ 0.51
LYSMD4Q5XG99 KRT18P67-201ENST00000432816 1264 ntBASIC18.24■□□□□ 0.51
LYSMD4Q5XG99 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC18.24■□□□□ 0.51
LYSMD4Q5XG99 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC18.24■□□□□ 0.51
LYSMD4Q5XG99 AC093909.1-201ENST00000504731 1122 ntBASIC18.24■□□□□ 0.51
LYSMD4Q5XG99 RNA5SP419-201ENST00000515908 135 ntBASIC18.24■□□□□ 0.51
LYSMD4Q5XG99 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC18.24■□□□□ 0.51
LYSMD4Q5XG99 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC18.24■□□□□ 0.51
LYSMD4Q5XG99 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC18.24■□□□□ 0.51
LYSMD4Q5XG99 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
LYSMD4Q5XG99 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC18.24■□□□□ 0.51
LYSMD4Q5XG99 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LYSMD4Q5XG99 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LYSMD4Q5XG99 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC18.24■□□□□ 0.51
LYSMD4Q5XG99 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC18.24■□□□□ 0.51
LYSMD4Q5XG99 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
LYSMD4Q5XG99 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
LYSMD4Q5XG99 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
LYSMD4Q5XG99 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms