Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC17.97■□□□□ 0.47
RNF220Q5VTB9 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC17.97■□□□□ 0.47
RNF220Q5VTB9 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
RNF220Q5VTB9 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
RNF220Q5VTB9 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC17.97■□□□□ 0.47
RNF220Q5VTB9 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
RNF220Q5VTB9 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
RNF220Q5VTB9 AL512353.2-201ENST00000448759 1962 ntBASIC17.97■□□□□ 0.47
RNF220Q5VTB9 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
RNF220Q5VTB9 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RNF220Q5VTB9 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
RNF220Q5VTB9 AC134043.2-201ENST00000624206 2238 ntBASIC17.96■□□□□ 0.47
RNF220Q5VTB9 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
RNF220Q5VTB9 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
RNF220Q5VTB9 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC17.96■□□□□ 0.47
RNF220Q5VTB9 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RNF220Q5VTB9 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC17.96■□□□□ 0.47
RNF220Q5VTB9 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
RNF220Q5VTB9 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RNF220Q5VTB9 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RNF220Q5VTB9 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
RNF220Q5VTB9 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RNF220Q5VTB9 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC17.96■□□□□ 0.47
RNF220Q5VTB9 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC17.96■□□□□ 0.47
RNF220Q5VTB9 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC17.96■□□□□ 0.47
RNF220Q5VTB9 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC17.96■□□□□ 0.47
RNF220Q5VTB9 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC17.96■□□□□ 0.47
RNF220Q5VTB9 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
RNF220Q5VTB9 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC17.96■□□□□ 0.47
RNF220Q5VTB9 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC17.96■□□□□ 0.47
RNF220Q5VTB9 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
RNF220Q5VTB9 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RNF220Q5VTB9 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RNF220Q5VTB9 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC17.96■□□□□ 0.47
RNF220Q5VTB9 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RNF220Q5VTB9 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.46
RNF220Q5VTB9 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
RNF220Q5VTB9 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
RNF220Q5VTB9 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
RNF220Q5VTB9 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
RNF220Q5VTB9 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC17.96■□□□□ 0.46
RNF220Q5VTB9 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC17.95■□□□□ 0.46
RNF220Q5VTB9 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RNF220Q5VTB9 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC17.95■□□□□ 0.46
RNF220Q5VTB9 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC17.95■□□□□ 0.46
RNF220Q5VTB9 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RNF220Q5VTB9 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC17.95■□□□□ 0.46
RNF220Q5VTB9 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
RNF220Q5VTB9 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RNF220Q5VTB9 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
RNF220Q5VTB9 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RNF220Q5VTB9 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RNF220Q5VTB9 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RNF220Q5VTB9 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
RNF220Q5VTB9 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
RNF220Q5VTB9 YBX1P10-201ENST00000444752 975 ntBASIC17.95■□□□□ 0.46
RNF220Q5VTB9 AC090192.1-201ENST00000517740 490 ntBASIC17.95■□□□□ 0.46
RNF220Q5VTB9 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC17.95■□□□□ 0.46
RNF220Q5VTB9 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC17.95■□□□□ 0.46
RNF220Q5VTB9 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC17.95■□□□□ 0.46
RNF220Q5VTB9 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RNF220Q5VTB9 AC120498.8-201ENST00000614275 531 ntBASIC17.95■□□□□ 0.46
RNF220Q5VTB9 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RNF220Q5VTB9 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RNF220Q5VTB9 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RNF220Q5VTB9 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
RNF220Q5VTB9 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RNF220Q5VTB9 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
RNF220Q5VTB9 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RNF220Q5VTB9 AL645608.8-201ENST00000606034 2086 ntBASIC17.95■□□□□ 0.46
RNF220Q5VTB9 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RNF220Q5VTB9 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RNF220Q5VTB9 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC17.95■□□□□ 0.46
RNF220Q5VTB9 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RNF220Q5VTB9 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
RNF220Q5VTB9 AL162727.3-201ENST00000635661 2787 ntBASIC17.95■□□□□ 0.46
RNF220Q5VTB9 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RNF220Q5VTB9 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC17.95■□□□□ 0.46
RNF220Q5VTB9 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC17.95■□□□□ 0.46
RNF220Q5VTB9 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RNF220Q5VTB9 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RNF220Q5VTB9 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
RNF220Q5VTB9 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC17.94■□□□□ 0.46
RNF220Q5VTB9 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
RNF220Q5VTB9 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
RNF220Q5VTB9 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RNF220Q5VTB9 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC17.94■□□□□ 0.46
RNF220Q5VTB9 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
RNF220Q5VTB9 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RNF220Q5VTB9 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
RNF220Q5VTB9 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC17.94■□□□□ 0.46
RNF220Q5VTB9 AP006587.1-201ENST00000534129 1502 ntBASIC17.94■□□□□ 0.46
RNF220Q5VTB9 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RNF220Q5VTB9 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RNF220Q5VTB9 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC17.94■□□□□ 0.46
RNF220Q5VTB9 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC17.94■□□□□ 0.46
RNF220Q5VTB9 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC17.94■□□□□ 0.46
RNF220Q5VTB9 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC17.94■□□□□ 0.46
RNF220Q5VTB9 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC17.94■□□□□ 0.46
RNF220Q5VTB9 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC17.94■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms