Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
CDC42BPAQ5VT25 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
CDC42BPAQ5VT25 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC28.19■■■□□ 2.1
CDC42BPAQ5VT25 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
CDC42BPAQ5VT25 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
CDC42BPAQ5VT25 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
CDC42BPAQ5VT25 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC28.19■■■□□ 2.1
CDC42BPAQ5VT25 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
CDC42BPAQ5VT25 AL158211.5-201ENST00000623583 2518 ntBASIC28.19■■■□□ 2.1
CDC42BPAQ5VT25 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC28.19■■■□□ 2.1
CDC42BPAQ5VT25 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
CDC42BPAQ5VT25 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
CDC42BPAQ5VT25 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
CDC42BPAQ5VT25 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
CDC42BPAQ5VT25 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
CDC42BPAQ5VT25 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
CDC42BPAQ5VT25 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC28.19■■■□□ 2.1
CDC42BPAQ5VT25 NARF-204ENST00000390006 1766 ntTSL 2 BASIC28.19■■■□□ 2.1
CDC42BPAQ5VT25 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
CDC42BPAQ5VT25 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC28.19■■■□□ 2.1
CDC42BPAQ5VT25 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
CDC42BPAQ5VT25 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC28.18■■■□□ 2.1
CDC42BPAQ5VT25 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC28.18■■■□□ 2.1
CDC42BPAQ5VT25 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC28.18■■■□□ 2.1
CDC42BPAQ5VT25 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
CDC42BPAQ5VT25 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC28.18■■■□□ 2.1
CDC42BPAQ5VT25 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC28.18■■■□□ 2.1
CDC42BPAQ5VT25 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
CDC42BPAQ5VT25 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC28.18■■■□□ 2.1
CDC42BPAQ5VT25 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC28.17■■■□□ 2.1
CDC42BPAQ5VT25 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
CDC42BPAQ5VT25 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC28.17■■■□□ 2.1
CDC42BPAQ5VT25 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC28.17■■■□□ 2.1
CDC42BPAQ5VT25 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC28.17■■■□□ 2.1
CDC42BPAQ5VT25 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC28.17■■■□□ 2.1
CDC42BPAQ5VT25 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
CDC42BPAQ5VT25 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC28.17■■■□□ 2.1
CDC42BPAQ5VT25 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
CDC42BPAQ5VT25 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC28.16■■■□□ 2.1
CDC42BPAQ5VT25 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
CDC42BPAQ5VT25 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
CDC42BPAQ5VT25 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
CDC42BPAQ5VT25 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC28.16■■■□□ 2.1
CDC42BPAQ5VT25 MIR574-201ENST00000385209 96 ntBASIC28.16■■■□□ 2.1
CDC42BPAQ5VT25 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
CDC42BPAQ5VT25 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC28.16■■■□□ 2.1
CDC42BPAQ5VT25 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
CDC42BPAQ5VT25 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC28.16■■■□□ 2.1
CDC42BPAQ5VT25 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
CDC42BPAQ5VT25 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC28.16■■■□□ 2.1
CDC42BPAQ5VT25 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC28.16■■■□□ 2.1
CDC42BPAQ5VT25 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
CDC42BPAQ5VT25 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC28.15■■■□□ 2.1
CDC42BPAQ5VT25 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
CDC42BPAQ5VT25 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC28.15■■■□□ 2.1
CDC42BPAQ5VT25 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
CDC42BPAQ5VT25 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC28.15■■■□□ 2.1
CDC42BPAQ5VT25 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC28.15■■■□□ 2.1
CDC42BPAQ5VT25 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC28.15■■■□□ 2.1
CDC42BPAQ5VT25 GPALPP1-207ENST00000611650 899 ntBASIC28.15■■■□□ 2.1
CDC42BPAQ5VT25 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC28.15■■■□□ 2.1
CDC42BPAQ5VT25 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC28.15■■■□□ 2.1
CDC42BPAQ5VT25 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
CDC42BPAQ5VT25 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC28.15■■■□□ 2.1
CDC42BPAQ5VT25 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
CDC42BPAQ5VT25 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
CDC42BPAQ5VT25 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
CDC42BPAQ5VT25 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
CDC42BPAQ5VT25 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
CDC42BPAQ5VT25 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC28.15■■■□□ 2.1
CDC42BPAQ5VT25 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
CDC42BPAQ5VT25 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC28.15■■■□□ 2.1
CDC42BPAQ5VT25 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC28.15■■■□□ 2.1
CDC42BPAQ5VT25 ABBA01031661.1-201ENST00000634362 1253 ntBASIC28.15■■■□□ 2.1
CDC42BPAQ5VT25 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
CDC42BPAQ5VT25 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
CDC42BPAQ5VT25 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC28.14■■■□□ 2.1
CDC42BPAQ5VT25 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
CDC42BPAQ5VT25 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC28.14■■■□□ 2.1
CDC42BPAQ5VT25 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC28.14■■■□□ 2.1
CDC42BPAQ5VT25 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
CDC42BPAQ5VT25 DDT-203ENST00000403754 569 ntTSL 3 BASIC28.14■■■□□ 2.1
CDC42BPAQ5VT25 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC28.14■■■□□ 2.1
CDC42BPAQ5VT25 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC28.14■■■□□ 2.1
CDC42BPAQ5VT25 DDT-206ENST00000430101 573 ntTSL 2 BASIC28.14■■■□□ 2.1
CDC42BPAQ5VT25 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC28.14■■■□□ 2.1
CDC42BPAQ5VT25 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC28.14■■■□□ 2.1
CDC42BPAQ5VT25 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC28.14■■■□□ 2.1
CDC42BPAQ5VT25 LINC01711-201ENST00000598340 967 ntBASIC28.14■■■□□ 2.1
CDC42BPAQ5VT25 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC28.14■■■□□ 2.09
CDC42BPAQ5VT25 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC28.14■■■□□ 2.09
CDC42BPAQ5VT25 AL024508.2-201ENST00000607749 1894 ntBASIC28.14■■■□□ 2.09
CDC42BPAQ5VT25 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC28.14■■■□□ 2.09
CDC42BPAQ5VT25 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
CDC42BPAQ5VT25 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC28.13■■■□□ 2.09
CDC42BPAQ5VT25 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
CDC42BPAQ5VT25 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC28.13■■■□□ 2.09
CDC42BPAQ5VT25 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
CDC42BPAQ5VT25 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC28.13■■■□□ 2.09
CDC42BPAQ5VT25 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC28.13■■■□□ 2.09
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms