Protein–RNA interactions for Protein: P63054

Pcp4, Calmodulin regulator protein PCP4, mousemouse

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcp4P63054 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Pcp4P63054 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Pcp4P63054 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Pcp4P63054 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Pcp4P63054 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Pcp4P63054 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Pcp4P63054 Gm29019-202ENSMUST00000188623 564 ntTSL 2 BASIC10.66□□□□□ -0.7
Pcp4P63054 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC10.66□□□□□ -0.7
Pcp4P63054 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Pcp4P63054 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Pcp4P63054 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Pcp4P63054 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Pcp4P63054 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Pcp4P63054 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Pcp4P63054 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Pcp4P63054 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Pcp4P63054 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Pcp4P63054 Atic-201ENSMUST00000027384 2845 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Pcp4P63054 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Pcp4P63054 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Pcp4P63054 AC162938.1-201ENSMUST00000213140 2323 ntBASIC10.66□□□□□ -0.7
Pcp4P63054 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Pcp4P63054 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Pcp4P63054 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Pcp4P63054 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Pcp4P63054 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Pcp4P63054 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Pcp4P63054 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Pcp4P63054 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Pcp4P63054 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Pcp4P63054 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
Pcp4P63054 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.7
Pcp4P63054 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Pcp4P63054 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Pcp4P63054 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Pcp4P63054 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Pcp4P63054 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Pcp4P63054 Ank2-221ENSMUST00000182994 2715 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Pcp4P63054 Muc13-201ENSMUST00000023520 2942 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Pcp4P63054 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Pcp4P63054 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Pcp4P63054 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
Pcp4P63054 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
Pcp4P63054 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Pcp4P63054 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Pcp4P63054 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.7
Pcp4P63054 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC10.65□□□□□ -0.71
Pcp4P63054 Olfr742-203ENSMUST00000217437 2244 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.71
Pcp4P63054 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
Pcp4P63054 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC10.65□□□□□ -0.71
Pcp4P63054 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
Pcp4P63054 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.71
Pcp4P63054 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
Pcp4P63054 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
Pcp4P63054 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
Pcp4P63054 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC10.65□□□□□ -0.71
Pcp4P63054 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC10.65□□□□□ -0.71
Pcp4P63054 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC10.65□□□□□ -0.71
Pcp4P63054 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC10.65□□□□□ -0.71
Pcp4P63054 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.71
Pcp4P63054 Gm37447-201ENSMUST00000195625 2928 ntBASIC10.64□□□□□ -0.71
Pcp4P63054 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Pcp4P63054 Gm20649-201ENSMUST00000160950 2740 ntTSL 2 BASIC10.64□□□□□ -0.71
Pcp4P63054 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Pcp4P63054 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Pcp4P63054 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC10.64□□□□□ -0.71
Pcp4P63054 Bmp5-201ENSMUST00000012281 3822 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Pcp4P63054 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Pcp4P63054 Nupl1-207ENSMUST00000225311 2475 ntBASIC10.64□□□□□ -0.71
Pcp4P63054 Gm37644-201ENSMUST00000192190 2270 ntBASIC10.64□□□□□ -0.71
Pcp4P63054 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Pcp4P63054 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Pcp4P63054 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Pcp4P63054 Olfr1415-202ENSMUST00000204009 2815 ntAPPRIS P1 TSL 3 BASIC10.64□□□□□ -0.71
Pcp4P63054 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Pcp4P63054 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC10.64□□□□□ -0.71
Pcp4P63054 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC10.64□□□□□ -0.71
Pcp4P63054 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Pcp4P63054 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Pcp4P63054 Gm37600-201ENSMUST00000193764 3292 ntBASIC10.64□□□□□ -0.71
Pcp4P63054 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Pcp4P63054 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Pcp4P63054 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Pcp4P63054 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Pcp4P63054 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC10.64□□□□□ -0.71
Pcp4P63054 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Pcp4P63054 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Pcp4P63054 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Pcp4P63054 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC10.64□□□□□ -0.71
Pcp4P63054 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC10.64□□□□□ -0.71
Pcp4P63054 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC10.64□□□□□ -0.71
Pcp4P63054 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Pcp4P63054 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC10.64□□□□□ -0.71
Pcp4P63054 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Pcp4P63054 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Pcp4P63054 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Pcp4P63054 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Pcp4P63054 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Pcp4P63054 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Pcp4P63054 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC10.63□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms