Protein–RNA interactions for Protein: P55773

CCL23, C-C motif chemokine 23, humanhuman

Predictions only

Length 120 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL23P55773 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC20.25■□□□□ 0.83
CCL23P55773 TREX1-205ENST00000625293 1783 ntBASIC20.25■□□□□ 0.83
CCL23P55773 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CCL23P55773 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CCL23P55773 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CCL23P55773 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CCL23P55773 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CCL23P55773 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC20.25■□□□□ 0.83
CCL23P55773 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CCL23P55773 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC20.24■□□□□ 0.83
CCL23P55773 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CCL23P55773 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
CCL23P55773 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
CCL23P55773 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC20.24■□□□□ 0.83
CCL23P55773 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
CCL23P55773 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC20.24■□□□□ 0.83
CCL23P55773 EMD-201ENST00000369835 966 ntTSL 3 BASIC20.24■□□□□ 0.83
CCL23P55773 MIR940-201ENST00000401276 94 ntBASIC20.24■□□□□ 0.83
CCL23P55773 POM121L3P-201ENST00000419331 1163 ntBASIC20.24■□□□□ 0.83
CCL23P55773 AF186996.4-201ENST00000467186 377 ntBASIC20.24■□□□□ 0.83
CCL23P55773 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC20.24■□□□□ 0.83
CCL23P55773 AC009065.1-201ENST00000564055 1225 ntBASIC20.24■□□□□ 0.83
CCL23P55773 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC20.24■□□□□ 0.83
CCL23P55773 MIR5100-201ENST00000579544 119 ntBASIC20.24■□□□□ 0.83
CCL23P55773 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC20.24■□□□□ 0.83
CCL23P55773 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
CCL23P55773 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CCL23P55773 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
CCL23P55773 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
CCL23P55773 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CCL23P55773 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CCL23P55773 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CCL23P55773 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC20.23■□□□□ 0.83
CCL23P55773 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CCL23P55773 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CCL23P55773 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC20.23■□□□□ 0.83
CCL23P55773 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CCL23P55773 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CCL23P55773 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
CCL23P55773 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CCL23P55773 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CCL23P55773 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CCL23P55773 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
CCL23P55773 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
CCL23P55773 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC20.23■□□□□ 0.83
CCL23P55773 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC20.23■□□□□ 0.83
CCL23P55773 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC20.23■□□□□ 0.83
CCL23P55773 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC20.23■□□□□ 0.83
CCL23P55773 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
CCL23P55773 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CCL23P55773 BNIP3P18-201ENST00000593976 575 ntBASIC20.23■□□□□ 0.83
CCL23P55773 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CCL23P55773 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CCL23P55773 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC20.23■□□□□ 0.83
CCL23P55773 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
CCL23P55773 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CCL23P55773 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC20.23■□□□□ 0.83
CCL23P55773 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCL23P55773 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCL23P55773 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCL23P55773 AC243591.1-201ENST00000452967 1364 ntBASIC20.22■□□□□ 0.83
CCL23P55773 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCL23P55773 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCL23P55773 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCL23P55773 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCL23P55773 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC20.22■□□□□ 0.83
CCL23P55773 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCL23P55773 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCL23P55773 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC20.22■□□□□ 0.83
CCL23P55773 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CCL23P55773 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC20.22■□□□□ 0.83
CCL23P55773 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC20.22■□□□□ 0.83
CCL23P55773 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC20.22■□□□□ 0.83
CCL23P55773 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC20.22■□□□□ 0.83
CCL23P55773 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC20.22■□□□□ 0.83
CCL23P55773 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
CCL23P55773 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC20.22■□□□□ 0.83
CCL23P55773 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCL23P55773 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
CCL23P55773 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
CCL23P55773 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
CCL23P55773 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CCL23P55773 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCL23P55773 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCL23P55773 FEM1AP3-201ENST00000403722 1741 ntBASIC20.22■□□□□ 0.83
CCL23P55773 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CCL23P55773 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
CCL23P55773 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
CCL23P55773 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CCL23P55773 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CCL23P55773 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
CCL23P55773 MIR1233-2-201ENST00000408138 82 ntBASIC20.21■□□□□ 0.83
CCL23P55773 MIR1233-1-201ENST00000408722 82 ntBASIC20.21■□□□□ 0.83
CCL23P55773 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CCL23P55773 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC20.21■□□□□ 0.83
CCL23P55773 AC093909.1-201ENST00000504731 1122 ntBASIC20.21■□□□□ 0.83
CCL23P55773 AC096582.2-201ENST00000510860 516 ntBASIC20.21■□□□□ 0.83
CCL23P55773 AC106730.1-201ENST00000566722 1090 ntBASIC20.21■□□□□ 0.83
CCL23P55773 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC20.21■□□□□ 0.83
CCL23P55773 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC20.21■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 57 ms