Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
HMGCLP35914 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC18.55■□□□□ 0.56
HMGCLP35914 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
HMGCLP35914 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC18.55■□□□□ 0.56
HMGCLP35914 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
HMGCLP35914 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
HMGCLP35914 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
HMGCLP35914 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
HMGCLP35914 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
HMGCLP35914 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
HMGCLP35914 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
HMGCLP35914 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC18.55■□□□□ 0.56
HMGCLP35914 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
HMGCLP35914 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
HMGCLP35914 GAD2-202ENST00000376248 680 ntTSL 5 BASIC18.55■□□□□ 0.56
HMGCLP35914 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
HMGCLP35914 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC18.55■□□□□ 0.56
HMGCLP35914 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC18.55■□□□□ 0.56
HMGCLP35914 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC18.55■□□□□ 0.56
HMGCLP35914 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC18.55■□□□□ 0.56
HMGCLP35914 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC18.55■□□□□ 0.56
HMGCLP35914 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
HMGCLP35914 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC18.55■□□□□ 0.56
HMGCLP35914 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
HMGCLP35914 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
HMGCLP35914 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC18.55■□□□□ 0.56
HMGCLP35914 AL020996.1-203ENST00000536896 2307 ntBASIC18.55■□□□□ 0.56
HMGCLP35914 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
HMGCLP35914 MYLKP1-201ENST00000509077 1580 ntBASIC18.55■□□□□ 0.56
HMGCLP35914 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC18.55■□□□□ 0.56
HMGCLP35914 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
HMGCLP35914 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
HMGCLP35914 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
HMGCLP35914 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
HMGCLP35914 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
HMGCLP35914 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC18.54■□□□□ 0.56
HMGCLP35914 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
HMGCLP35914 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
HMGCLP35914 AC073592.3-201ENST00000625118 1834 ntBASIC18.54■□□□□ 0.56
HMGCLP35914 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC18.54■□□□□ 0.56
HMGCLP35914 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
HMGCLP35914 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
HMGCLP35914 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC18.54■□□□□ 0.56
HMGCLP35914 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
HMGCLP35914 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
HMGCLP35914 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
HMGCLP35914 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC18.54■□□□□ 0.56
HMGCLP35914 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC18.54■□□□□ 0.56
HMGCLP35914 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC18.54■□□□□ 0.56
HMGCLP35914 BX664615.1-201ENST00000443558 458 ntBASIC18.54■□□□□ 0.56
HMGCLP35914 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
HMGCLP35914 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC18.54■□□□□ 0.56
HMGCLP35914 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC18.54■□□□□ 0.56
HMGCLP35914 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
HMGCLP35914 AC104390.1-201ENST00000555663 520 ntBASIC18.54■□□□□ 0.56
HMGCLP35914 TK2-213ENST00000563369 882 ntTSL 5 BASIC18.54■□□□□ 0.56
HMGCLP35914 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
HMGCLP35914 AL031432.5-201ENST00000641059 760 ntBASIC18.54■□□□□ 0.56
HMGCLP35914 AC092865.7-201ENST00000641832 219 ntBASIC18.54■□□□□ 0.56
HMGCLP35914 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
HMGCLP35914 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
HMGCLP35914 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
HMGCLP35914 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC18.54■□□□□ 0.56
HMGCLP35914 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
HMGCLP35914 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
HMGCLP35914 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
HMGCLP35914 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
HMGCLP35914 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC18.54■□□□□ 0.56
HMGCLP35914 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
HMGCLP35914 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
HMGCLP35914 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
HMGCLP35914 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC18.53■□□□□ 0.56
HMGCLP35914 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
HMGCLP35914 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
HMGCLP35914 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC18.53■□□□□ 0.56
HMGCLP35914 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
HMGCLP35914 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
HMGCLP35914 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
HMGCLP35914 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
HMGCLP35914 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
HMGCLP35914 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
HMGCLP35914 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC18.53■□□□□ 0.56
HMGCLP35914 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
HMGCLP35914 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC18.53■□□□□ 0.56
HMGCLP35914 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC18.53■□□□□ 0.56
HMGCLP35914 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
HMGCLP35914 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC18.53■□□□□ 0.56
HMGCLP35914 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC18.53■□□□□ 0.56
HMGCLP35914 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC18.53■□□□□ 0.56
HMGCLP35914 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC18.53■□□□□ 0.56
HMGCLP35914 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
HMGCLP35914 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC18.53■□□□□ 0.56
HMGCLP35914 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC18.53■□□□□ 0.56
HMGCLP35914 ETFA-216ENST00000560726 942 ntTSL 3 BASIC18.53■□□□□ 0.56
HMGCLP35914 NAT14-202ENST00000587400 416 ntTSL 5 BASIC18.53■□□□□ 0.56
HMGCLP35914 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC18.53■□□□□ 0.56
HMGCLP35914 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC18.53■□□□□ 0.56
HMGCLP35914 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC18.53■□□□□ 0.56
HMGCLP35914 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC18.53■□□□□ 0.56
HMGCLP35914 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC18.53■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms