Protein–RNA interactions for Protein: P13942

COL11A2, Collagen alpha-2(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2P13942 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
COL11A2P13942 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC22.78■■□□□ 1.24
COL11A2P13942 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC22.78■■□□□ 1.24
COL11A2P13942 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC22.78■■□□□ 1.24
COL11A2P13942 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC22.78■■□□□ 1.24
COL11A2P13942 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC22.78■■□□□ 1.24
COL11A2P13942 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
COL11A2P13942 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC22.78■■□□□ 1.24
COL11A2P13942 FAM220CP-201ENST00000395253 831 ntBASIC22.78■■□□□ 1.24
COL11A2P13942 POM121L3P-201ENST00000419331 1163 ntBASIC22.78■■□□□ 1.24
COL11A2P13942 THAP5-204ENST00000438865 868 ntTSL 2 BASIC22.78■■□□□ 1.24
COL11A2P13942 SCARNA2-201ENST00000458748 420 ntBASIC22.78■■□□□ 1.24
COL11A2P13942 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC22.78■■□□□ 1.24
COL11A2P13942 RPL13AP23-201ENST00000480739 586 ntBASIC22.78■■□□□ 1.24
COL11A2P13942 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC22.78■■□□□ 1.24
COL11A2P13942 AL591684.3-201ENST00000605187 298 ntBASIC22.78■■□□□ 1.24
COL11A2P13942 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC22.78■■□□□ 1.24
COL11A2P13942 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
COL11A2P13942 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
COL11A2P13942 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC22.77■■□□□ 1.24
COL11A2P13942 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC22.77■■□□□ 1.24
COL11A2P13942 KRT18P41-201ENST00000518924 1277 ntBASIC22.77■■□□□ 1.24
COL11A2P13942 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC22.77■■□□□ 1.24
COL11A2P13942 AC140113.2-201ENST00000604370 208 ntBASIC22.77■■□□□ 1.24
COL11A2P13942 PRKN-208ENST00000610470 531 ntTSL 2 BASIC22.77■■□□□ 1.24
COL11A2P13942 PRKN-209ENST00000612485 225 ntTSL 5 BASIC22.77■■□□□ 1.24
COL11A2P13942 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
COL11A2P13942 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
COL11A2P13942 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
COL11A2P13942 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC22.77■■□□□ 1.24
COL11A2P13942 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
COL11A2P13942 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
COL11A2P13942 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
COL11A2P13942 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC22.77■■□□□ 1.24
COL11A2P13942 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
COL11A2P13942 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC22.77■■□□□ 1.24
COL11A2P13942 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.23
COL11A2P13942 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC22.77■■□□□ 1.23
COL11A2P13942 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC22.77■■□□□ 1.23
COL11A2P13942 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC22.77■■□□□ 1.23
COL11A2P13942 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC22.77■■□□□ 1.23
COL11A2P13942 AC113404.2-201ENST00000507884 177 ntBASIC22.77■■□□□ 1.23
COL11A2P13942 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC22.77■■□□□ 1.23
COL11A2P13942 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC22.77■■□□□ 1.23
COL11A2P13942 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC22.77■■□□□ 1.23
COL11A2P13942 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.23
COL11A2P13942 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC22.76■■□□□ 1.23
COL11A2P13942 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC22.76■■□□□ 1.23
COL11A2P13942 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC22.76■■□□□ 1.23
COL11A2P13942 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC22.76■■□□□ 1.23
COL11A2P13942 NARF-204ENST00000390006 1766 ntTSL 2 BASIC22.76■■□□□ 1.23
COL11A2P13942 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
COL11A2P13942 PMS2P7-201ENST00000506558 1336 ntBASIC22.76■■□□□ 1.23
COL11A2P13942 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC22.76■■□□□ 1.23
COL11A2P13942 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC22.76■■□□□ 1.23
COL11A2P13942 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC22.76■■□□□ 1.23
COL11A2P13942 LINC01006-201ENST00000333319 2292 ntBASIC22.76■■□□□ 1.23
COL11A2P13942 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC22.76■■□□□ 1.23
COL11A2P13942 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC22.76■■□□□ 1.23
COL11A2P13942 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC22.76■■□□□ 1.23
COL11A2P13942 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
COL11A2P13942 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
COL11A2P13942 DDT-203ENST00000403754 569 ntTSL 3 BASIC22.76■■□□□ 1.23
COL11A2P13942 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
COL11A2P13942 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC22.76■■□□□ 1.23
COL11A2P13942 DDT-206ENST00000430101 573 ntTSL 2 BASIC22.76■■□□□ 1.23
COL11A2P13942 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC22.76■■□□□ 1.23
COL11A2P13942 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
COL11A2P13942 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC22.76■■□□□ 1.23
COL11A2P13942 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
COL11A2P13942 FP475955.4-201ENST00000623131 1990 ntBASIC22.76■■□□□ 1.23
COL11A2P13942 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
COL11A2P13942 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
COL11A2P13942 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
COL11A2P13942 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC22.75■■□□□ 1.23
COL11A2P13942 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC22.75■■□□□ 1.23
COL11A2P13942 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
COL11A2P13942 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC22.75■■□□□ 1.23
COL11A2P13942 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
COL11A2P13942 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC22.75■■□□□ 1.23
COL11A2P13942 FABP5-202ENST00000396359 986 ntTSL 5 BASIC22.75■■□□□ 1.23
COL11A2P13942 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
COL11A2P13942 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
COL11A2P13942 HIST2H3DP1-201ENST00000401004 416 ntBASIC22.75■■□□□ 1.23
COL11A2P13942 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC22.75■■□□□ 1.23
COL11A2P13942 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC22.75■■□□□ 1.23
COL11A2P13942 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
COL11A2P13942 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC22.75■■□□□ 1.23
COL11A2P13942 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
COL11A2P13942 FEM1AP3-201ENST00000403722 1741 ntBASIC22.75■■□□□ 1.23
COL11A2P13942 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC22.75■■□□□ 1.23
COL11A2P13942 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
COL11A2P13942 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC22.75■■□□□ 1.23
COL11A2P13942 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC22.75■■□□□ 1.23
COL11A2P13942 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC22.74■■□□□ 1.23
COL11A2P13942 AC034105.1-201ENST00000563488 319 ntBASIC22.74■■□□□ 1.23
COL11A2P13942 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC22.74■■□□□ 1.23
COL11A2P13942 AL138831.2-201ENST00000606564 490 ntBASIC22.74■■□□□ 1.23
COL11A2P13942 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC22.74■■□□□ 1.23
COL11A2P13942 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
Retrieved 100 of 98,524 protein–RNA pairs in 66.3 ms