Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC32.58■■■□□ 2.81
TOP2AP11388 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC32.58■■■□□ 2.81
TOP2AP11388 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC32.58■■■□□ 2.81
TOP2AP11388 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC32.58■■■□□ 2.81
TOP2AP11388 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC32.58■■■□□ 2.81
TOP2AP11388 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC32.58■■■□□ 2.81
TOP2AP11388 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC32.58■■■□□ 2.81
TOP2AP11388 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC32.58■■■□□ 2.81
TOP2AP11388 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC32.58■■■□□ 2.81
TOP2AP11388 UROS-202ENST00000368778 1556 ntTSL 2 BASIC32.58■■■□□ 2.81
TOP2AP11388 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC32.57■■■□□ 2.8
TOP2AP11388 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC32.57■■■□□ 2.8
TOP2AP11388 FGFR3P6-201ENST00000457012 610 ntBASIC32.57■■■□□ 2.8
TOP2AP11388 AC011840.4-201ENST00000578471 627 ntBASIC32.57■■■□□ 2.8
TOP2AP11388 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC32.57■■■□□ 2.8
TOP2AP11388 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC32.57■■■□□ 2.8
TOP2AP11388 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC32.57■■■□□ 2.8
TOP2AP11388 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC32.57■■■□□ 2.8
TOP2AP11388 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC32.57■■■□□ 2.8
TOP2AP11388 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC32.57■■■□□ 2.8
TOP2AP11388 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC32.57■■■□□ 2.8
TOP2AP11388 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC32.57■■■□□ 2.8
TOP2AP11388 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC32.57■■■□□ 2.8
TOP2AP11388 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC32.56■■■□□ 2.8
TOP2AP11388 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC32.56■■■□□ 2.8
TOP2AP11388 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC32.56■■■□□ 2.8
TOP2AP11388 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC32.56■■■□□ 2.8
TOP2AP11388 FAM197Y8-203ENST00000450145 560 ntBASIC32.56■■■□□ 2.8
TOP2AP11388 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC32.56■■■□□ 2.8
TOP2AP11388 ANKRD20A8P-203ENST00000641373 517 ntBASIC32.56■■■□□ 2.8
TOP2AP11388 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC32.56■■■□□ 2.8
TOP2AP11388 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC32.56■■■□□ 2.8
TOP2AP11388 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC32.56■■■□□ 2.8
TOP2AP11388 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC32.56■■■□□ 2.8
TOP2AP11388 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC32.56■■■□□ 2.8
TOP2AP11388 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC32.56■■■□□ 2.8
TOP2AP11388 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC32.56■■■□□ 2.8
TOP2AP11388 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC32.56■■■□□ 2.8
TOP2AP11388 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC32.56■■■□□ 2.8
TOP2AP11388 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC32.56■■■□□ 2.8
TOP2AP11388 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC32.56■■■□□ 2.8
TOP2AP11388 MOK-208ENST00000519058 917 ntTSL 2 BASIC32.56■■■□□ 2.8
TOP2AP11388 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC32.56■■■□□ 2.8
TOP2AP11388 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC32.56■■■□□ 2.8
TOP2AP11388 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC32.56■■■□□ 2.8
TOP2AP11388 AC139530.3-201ENST00000620344 690 ntBASIC32.56■■■□□ 2.8
TOP2AP11388 NARF-204ENST00000390006 1766 ntTSL 2 BASIC32.56■■■□□ 2.8
TOP2AP11388 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC32.56■■■□□ 2.8
TOP2AP11388 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC32.55■■■□□ 2.8
TOP2AP11388 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC32.55■■■□□ 2.8
TOP2AP11388 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC32.55■■■□□ 2.8
TOP2AP11388 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC32.55■■■□□ 2.8
TOP2AP11388 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC32.55■■■□□ 2.8
TOP2AP11388 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC32.55■■■□□ 2.8
TOP2AP11388 MIR149-201ENST00000384879 89 ntBASIC32.55■■■□□ 2.8
TOP2AP11388 AL049840.3-201ENST00000602669 611 ntBASIC32.55■■■□□ 2.8
TOP2AP11388 AC064862.7-201ENST00000604520 867 ntBASIC32.55■■■□□ 2.8
TOP2AP11388 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC32.55■■■□□ 2.8
TOP2AP11388 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC32.55■■■□□ 2.8
TOP2AP11388 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC32.55■■■□□ 2.8
TOP2AP11388 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC32.54■■■□□ 2.8
TOP2AP11388 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC32.54■■■□□ 2.8
TOP2AP11388 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC32.54■■■□□ 2.8
TOP2AP11388 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC32.54■■■□□ 2.8
TOP2AP11388 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC32.54■■■□□ 2.8
TOP2AP11388 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC32.54■■■□□ 2.8
TOP2AP11388 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC32.54■■■□□ 2.8
TOP2AP11388 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC32.54■■■□□ 2.8
TOP2AP11388 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC32.54■■■□□ 2.8
TOP2AP11388 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC32.54■■■□□ 2.8
TOP2AP11388 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC32.54■■■□□ 2.8
TOP2AP11388 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC32.54■■■□□ 2.8
TOP2AP11388 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC32.54■■■□□ 2.8
TOP2AP11388 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC32.54■■■□□ 2.8
TOP2AP11388 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC32.54■■■□□ 2.8
TOP2AP11388 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC32.54■■■□□ 2.8
TOP2AP11388 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC32.54■■■□□ 2.8
TOP2AP11388 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC32.54■■■□□ 2.8
TOP2AP11388 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC32.54■■■□□ 2.8
TOP2AP11388 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC32.54■■■□□ 2.8
TOP2AP11388 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC32.54■■■□□ 2.8
TOP2AP11388 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC32.54■■■□□ 2.8
TOP2AP11388 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC32.53■■■□□ 2.8
TOP2AP11388 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC32.53■■■□□ 2.8
TOP2AP11388 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC32.53■■■□□ 2.8
TOP2AP11388 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC32.53■■■□□ 2.8
TOP2AP11388 AL163051.1-201ENST00000569214 1512 ntBASIC32.53■■■□□ 2.8
TOP2AP11388 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC32.53■■■□□ 2.8
TOP2AP11388 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC32.53■■■□□ 2.8
TOP2AP11388 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC32.53■■■□□ 2.8
TOP2AP11388 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC32.53■■■□□ 2.8
TOP2AP11388 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC32.53■■■□□ 2.8
TOP2AP11388 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC32.53■■■□□ 2.8
TOP2AP11388 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC32.53■■■□□ 2.8
TOP2AP11388 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC32.52■■■□□ 2.8
TOP2AP11388 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC32.52■■■□□ 2.8
TOP2AP11388 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC32.52■■■□□ 2.8
TOP2AP11388 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC32.52■■■□□ 2.8
TOP2AP11388 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC32.52■■■□□ 2.8
TOP2AP11388 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC32.52■■■□□ 2.8
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms