Protein–RNA interactions for Protein: O60383

GDF9, Growth/differentiation factor 9, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF9O60383 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
GDF9O60383 CSF3-203ENST00000394148 622 ntTSL 3 BASIC18.12■□□□□ 0.49
GDF9O60383 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC18.12■□□□□ 0.49
GDF9O60383 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
GDF9O60383 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC18.12■□□□□ 0.49
GDF9O60383 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC18.12■□□□□ 0.49
GDF9O60383 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC18.12■□□□□ 0.49
GDF9O60383 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC18.12■□□□□ 0.49
GDF9O60383 AL355877.3-201ENST00000622820 899 ntBASIC18.12■□□□□ 0.49
GDF9O60383 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
GDF9O60383 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
GDF9O60383 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
GDF9O60383 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
GDF9O60383 AL353692.3-201ENST00000407031 1396 ntBASIC18.12■□□□□ 0.49
GDF9O60383 MED17-221ENST00000639724 2317 ntTSL 5 BASIC18.12■□□□□ 0.49
GDF9O60383 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
GDF9O60383 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC18.12■□□□□ 0.49
GDF9O60383 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
GDF9O60383 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
GDF9O60383 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC18.12■□□□□ 0.49
GDF9O60383 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC18.11■□□□□ 0.49
GDF9O60383 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC18.11■□□□□ 0.49
GDF9O60383 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
GDF9O60383 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
GDF9O60383 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC18.11■□□□□ 0.49
GDF9O60383 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
GDF9O60383 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
GDF9O60383 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
GDF9O60383 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
GDF9O60383 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
GDF9O60383 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
GDF9O60383 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
GDF9O60383 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
GDF9O60383 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
GDF9O60383 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC18.11■□□□□ 0.49
GDF9O60383 PPOX-214ENST00000535223 664 ntTSL 3 BASIC18.11■□□□□ 0.49
GDF9O60383 AC145285.3-201ENST00000564603 959 ntBASIC18.11■□□□□ 0.49
GDF9O60383 AC024563.2-201ENST00000603282 481 ntBASIC18.11■□□□□ 0.49
GDF9O60383 FAM197Y3-203ENST00000618346 717 ntBASIC18.11■□□□□ 0.49
GDF9O60383 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
GDF9O60383 AC083906.6-201ENST00000641366 219 ntBASIC18.11■□□□□ 0.49
GDF9O60383 AC079781.4-201ENST00000641908 219 ntBASIC18.11■□□□□ 0.49
GDF9O60383 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC18.11■□□□□ 0.49
GDF9O60383 KRT8P7-201ENST00000533003 1432 ntBASIC18.11■□□□□ 0.49
GDF9O60383 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC18.11■□□□□ 0.49
GDF9O60383 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC18.11■□□□□ 0.49
GDF9O60383 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC18.11■□□□□ 0.49
GDF9O60383 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
GDF9O60383 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
GDF9O60383 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
GDF9O60383 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC18.11■□□□□ 0.49
GDF9O60383 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
GDF9O60383 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
GDF9O60383 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC18.11■□□□□ 0.49
GDF9O60383 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC18.11■□□□□ 0.49
GDF9O60383 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC18.11■□□□□ 0.49
GDF9O60383 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
GDF9O60383 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
GDF9O60383 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC18.1■□□□□ 0.49
GDF9O60383 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
GDF9O60383 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
GDF9O60383 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
GDF9O60383 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
GDF9O60383 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
GDF9O60383 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC18.1■□□□□ 0.49
GDF9O60383 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
GDF9O60383 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC18.1■□□□□ 0.49
GDF9O60383 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
GDF9O60383 HOXB1-202ENST00000577092 1414 ntBASIC18.1■□□□□ 0.49
GDF9O60383 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
GDF9O60383 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC18.1■□□□□ 0.49
GDF9O60383 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
GDF9O60383 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
GDF9O60383 YBX2P1-201ENST00000394192 760 ntBASIC18.1■□□□□ 0.49
GDF9O60383 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC18.1■□□□□ 0.49
GDF9O60383 THAP5-204ENST00000438865 868 ntTSL 2 BASIC18.1■□□□□ 0.49
GDF9O60383 AC004967.1-201ENST00000453589 447 ntBASIC18.1■□□□□ 0.49
GDF9O60383 FGFR3P6-201ENST00000457012 610 ntBASIC18.1■□□□□ 0.49
GDF9O60383 IGHV3-22-201ENST00000520721 359 ntBASIC18.1■□□□□ 0.49
GDF9O60383 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC18.1■□□□□ 0.49
GDF9O60383 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC18.1■□□□□ 0.49
GDF9O60383 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC18.1■□□□□ 0.49
GDF9O60383 AC134684.3-201ENST00000641758 218 ntBASIC18.1■□□□□ 0.49
GDF9O60383 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC18.1■□□□□ 0.49
GDF9O60383 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
GDF9O60383 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
GDF9O60383 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
GDF9O60383 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
GDF9O60383 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
GDF9O60383 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC18.09■□□□□ 0.49
GDF9O60383 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC18.09■□□□□ 0.49
GDF9O60383 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
GDF9O60383 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
GDF9O60383 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
GDF9O60383 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
GDF9O60383 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
GDF9O60383 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC18.09■□□□□ 0.49
GDF9O60383 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
GDF9O60383 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
GDF9O60383 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms