Protein–RNA interactions for Protein: O00268

TAF4, Transcription initiation factor TFIID subunit 4, humanhuman

Predictions only

Length 1,085 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TAF4O00268 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TAF4O00268 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC18.25■□□□□ 0.51
TAF4O00268 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TAF4O00268 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
TAF4O00268 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TAF4O00268 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
TAF4O00268 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TAF4O00268 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC18.25■□□□□ 0.51
TAF4O00268 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
TAF4O00268 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TAF4O00268 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC18.24■□□□□ 0.51
TAF4O00268 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TAF4O00268 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TAF4O00268 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC18.24■□□□□ 0.51
TAF4O00268 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
TAF4O00268 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TAF4O00268 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.24■□□□□ 0.51
TAF4O00268 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
TAF4O00268 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC18.24■□□□□ 0.51
TAF4O00268 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
TAF4O00268 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
TAF4O00268 HBZP1-201ENST00000354915 429 ntBASIC18.24■□□□□ 0.51
TAF4O00268 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TAF4O00268 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
TAF4O00268 DERL1-203ENST00000419562 918 ntTSL 2 BASIC18.24■□□□□ 0.51
TAF4O00268 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TAF4O00268 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC18.24■□□□□ 0.51
TAF4O00268 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC18.24■□□□□ 0.51
TAF4O00268 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TAF4O00268 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC18.24■□□□□ 0.51
TAF4O00268 AC116351.2-201ENST00000606540 1585 ntBASIC18.24■□□□□ 0.51
TAF4O00268 BX119927.1-201ENST00000636596 1552 ntBASIC18.24■□□□□ 0.51
TAF4O00268 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
TAF4O00268 GOLGA6L3-201ENST00000507199 1679 ntBASIC18.24■□□□□ 0.51
TAF4O00268 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
TAF4O00268 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC18.24■□□□□ 0.51
TAF4O00268 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC18.24■□□□□ 0.51
TAF4O00268 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC18.24■□□□□ 0.51
TAF4O00268 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TAF4O00268 KRT18P1-202ENST00000452408 1331 ntBASIC18.23■□□□□ 0.51
TAF4O00268 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC18.23■□□□□ 0.51
TAF4O00268 KRT8P17-201ENST00000453110 1448 ntBASIC18.23■□□□□ 0.51
TAF4O00268 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC18.23■□□□□ 0.51
TAF4O00268 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TAF4O00268 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TAF4O00268 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TAF4O00268 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TAF4O00268 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TAF4O00268 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TAF4O00268 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC18.23■□□□□ 0.51
TAF4O00268 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TAF4O00268 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
TAF4O00268 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC18.23■□□□□ 0.51
TAF4O00268 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC18.23■□□□□ 0.51
TAF4O00268 AP002469.2-201ENST00000531724 424 ntBASIC18.23■□□□□ 0.51
TAF4O00268 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC18.23■□□□□ 0.51
TAF4O00268 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC18.23■□□□□ 0.51
TAF4O00268 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TAF4O00268 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TAF4O00268 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC18.23■□□□□ 0.51
TAF4O00268 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TAF4O00268 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TAF4O00268 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TAF4O00268 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
TAF4O00268 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC18.22■□□□□ 0.51
TAF4O00268 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
TAF4O00268 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
TAF4O00268 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
TAF4O00268 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TAF4O00268 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TAF4O00268 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TAF4O00268 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TAF4O00268 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TAF4O00268 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
TAF4O00268 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TAF4O00268 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TAF4O00268 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TAF4O00268 TEX30-205ENST00000376029 959 ntTSL 2 BASIC18.22■□□□□ 0.51
TAF4O00268 HMGN1P19-201ENST00000436976 333 ntBASIC18.22■□□□□ 0.51
TAF4O00268 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
TAF4O00268 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TAF4O00268 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC18.22■□□□□ 0.51
TAF4O00268 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
TAF4O00268 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC18.22■□□□□ 0.51
TAF4O00268 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC18.22■□□□□ 0.51
TAF4O00268 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
TAF4O00268 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
TAF4O00268 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
TAF4O00268 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TAF4O00268 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TAF4O00268 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC18.22■□□□□ 0.51
TAF4O00268 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC18.22■□□□□ 0.51
TAF4O00268 HCG11-201ENST00000411553 5696 ntBASIC18.22■□□□□ 0.51
TAF4O00268 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TAF4O00268 AC022898.2-201ENST00000616822 1312 ntBASIC18.22■□□□□ 0.51
TAF4O00268 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TAF4O00268 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC18.22■□□□□ 0.51
TAF4O00268 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
TAF4O00268 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TAF4O00268 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC18.21■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 74.9 ms