Protein–RNA interactions for Protein: A0A075B615

Trav4n-4, T cell receptor alpha variable 4D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4n-4A0A075B615 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav4n-4A0A075B615 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Trav4n-4A0A075B615 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav4n-4A0A075B615 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav4n-4A0A075B615 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC10.98□□□□□ -0.65
Trav4n-4A0A075B615 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC10.98□□□□□ -0.65
Trav4n-4A0A075B615 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav4n-4A0A075B615 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC10.98□□□□□ -0.65
Trav4n-4A0A075B615 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav4n-4A0A075B615 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Trav4n-4A0A075B615 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav4n-4A0A075B615 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav4n-4A0A075B615 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC10.98□□□□□ -0.65
Trav4n-4A0A075B615 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC10.98□□□□□ -0.65
Trav4n-4A0A075B615 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav4n-4A0A075B615 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav4n-4A0A075B615 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav4n-4A0A075B615 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav4n-4A0A075B615 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC10.98□□□□□ -0.65
Trav4n-4A0A075B615 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Trav4n-4A0A075B615 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
Trav4n-4A0A075B615 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC10.98□□□□□ -0.65
Trav4n-4A0A075B615 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC10.98□□□□□ -0.65
Trav4n-4A0A075B615 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav4n-4A0A075B615 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav4n-4A0A075B615 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav4n-4A0A075B615 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav4n-4A0A075B615 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav4n-4A0A075B615 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Trav4n-4A0A075B615 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav4n-4A0A075B615 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav4n-4A0A075B615 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav4n-4A0A075B615 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Trav4n-4A0A075B615 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Trav4n-4A0A075B615 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav4n-4A0A075B615 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Trav4n-4A0A075B615 Gm44291-201ENSMUST00000203102 2865 ntBASIC10.97□□□□□ -0.65
Trav4n-4A0A075B615 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Trav4n-4A0A075B615 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav4n-4A0A075B615 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav4n-4A0A075B615 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav4n-4A0A075B615 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC10.97□□□□□ -0.65
Trav4n-4A0A075B615 Gm24841-201ENSMUST00000158676 357 ntBASIC10.97□□□□□ -0.65
Trav4n-4A0A075B615 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav4n-4A0A075B615 Gm43017-201ENSMUST00000198296 752 ntBASIC10.97□□□□□ -0.65
Trav4n-4A0A075B615 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav4n-4A0A075B615 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
Trav4n-4A0A075B615 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC10.97□□□□□ -0.65
Trav4n-4A0A075B615 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav4n-4A0A075B615 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav4n-4A0A075B615 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav4n-4A0A075B615 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav4n-4A0A075B615 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav4n-4A0A075B615 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav4n-4A0A075B615 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC10.97□□□□□ -0.65
Trav4n-4A0A075B615 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Trav4n-4A0A075B615 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav4n-4A0A075B615 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav4n-4A0A075B615 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav4n-4A0A075B615 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav4n-4A0A075B615 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav4n-4A0A075B615 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
Trav4n-4A0A075B615 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav4n-4A0A075B615 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC10.97□□□□□ -0.65
Trav4n-4A0A075B615 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav4n-4A0A075B615 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav4n-4A0A075B615 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.65
Trav4n-4A0A075B615 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav4n-4A0A075B615 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC10.96□□□□□ -0.65
Trav4n-4A0A075B615 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav4n-4A0A075B615 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav4n-4A0A075B615 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav4n-4A0A075B615 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.65
Trav4n-4A0A075B615 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC10.96□□□□□ -0.65
Trav4n-4A0A075B615 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC10.96□□□□□ -0.65
Trav4n-4A0A075B615 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Trav4n-4A0A075B615 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav4n-4A0A075B615 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav4n-4A0A075B615 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.65
Trav4n-4A0A075B615 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
Trav4n-4A0A075B615 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav4n-4A0A075B615 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC10.96□□□□□ -0.65
Trav4n-4A0A075B615 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Trav4n-4A0A075B615 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav4n-4A0A075B615 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav4n-4A0A075B615 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav4n-4A0A075B615 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav4n-4A0A075B615 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav4n-4A0A075B615 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav4n-4A0A075B615 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
Trav4n-4A0A075B615 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC10.96□□□□□ -0.65
Trav4n-4A0A075B615 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC10.96□□□□□ -0.65
Trav4n-4A0A075B615 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav4n-4A0A075B615 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC10.96□□□□□ -0.65
Trav4n-4A0A075B615 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC10.96□□□□□ -0.65
Trav4n-4A0A075B615 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav4n-4A0A075B615 Ap3s1-204ENSMUST00000225520 957 ntBASIC10.96□□□□□ -0.65
Trav4n-4A0A075B615 Mtag2-201ENSMUST00000058665 714 ntBASIC10.96□□□□□ -0.65
Trav4n-4A0A075B615 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Trav4n-4A0A075B615 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC10.96□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms