Protein–RNA interactions for Protein: Q9Y5S2

CDC42BPB, Serine/threonine-protein kinase MRCK beta, humanhuman

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPBQ9Y5S2 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC28.19■■■□□ 2.1
CDC42BPBQ9Y5S2 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
CDC42BPBQ9Y5S2 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
CDC42BPBQ9Y5S2 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
CDC42BPBQ9Y5S2 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC28.19■■■□□ 2.1
CDC42BPBQ9Y5S2 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC28.19■■■□□ 2.1
CDC42BPBQ9Y5S2 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
CDC42BPBQ9Y5S2 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC28.19■■■□□ 2.1
CDC42BPBQ9Y5S2 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC28.18■■■□□ 2.1
CDC42BPBQ9Y5S2 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC28.18■■■□□ 2.1
CDC42BPBQ9Y5S2 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC28.18■■■□□ 2.1
CDC42BPBQ9Y5S2 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
CDC42BPBQ9Y5S2 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC28.18■■■□□ 2.1
CDC42BPBQ9Y5S2 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC28.18■■■□□ 2.1
CDC42BPBQ9Y5S2 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
CDC42BPBQ9Y5S2 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC28.18■■■□□ 2.1
CDC42BPBQ9Y5S2 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
CDC42BPBQ9Y5S2 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC28.18■■■□□ 2.1
CDC42BPBQ9Y5S2 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
CDC42BPBQ9Y5S2 RPL18-209ENST00000550645 463 ntTSL 5 BASIC28.18■■■□□ 2.1
CDC42BPBQ9Y5S2 RPL18-214ENST00000552588 559 ntTSL 3 BASIC28.18■■■□□ 2.1
CDC42BPBQ9Y5S2 AC009065.1-201ENST00000564055 1225 ntBASIC28.18■■■□□ 2.1
CDC42BPBQ9Y5S2 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC28.18■■■□□ 2.1
CDC42BPBQ9Y5S2 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
CDC42BPBQ9Y5S2 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC28.18■■■□□ 2.1
CDC42BPBQ9Y5S2 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
CDC42BPBQ9Y5S2 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC28.17■■■□□ 2.1
CDC42BPBQ9Y5S2 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
CDC42BPBQ9Y5S2 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC28.17■■■□□ 2.1
CDC42BPBQ9Y5S2 NFYC-AS1-201ENST00000606277 1687 ntBASIC28.17■■■□□ 2.1
CDC42BPBQ9Y5S2 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
CDC42BPBQ9Y5S2 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC28.17■■■□□ 2.1
CDC42BPBQ9Y5S2 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
CDC42BPBQ9Y5S2 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
CDC42BPBQ9Y5S2 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
CDC42BPBQ9Y5S2 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC28.17■■■□□ 2.1
CDC42BPBQ9Y5S2 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
CDC42BPBQ9Y5S2 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC28.17■■■□□ 2.1
CDC42BPBQ9Y5S2 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC28.17■■■□□ 2.1
CDC42BPBQ9Y5S2 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
CDC42BPBQ9Y5S2 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
CDC42BPBQ9Y5S2 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
CDC42BPBQ9Y5S2 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC28.16■■■□□ 2.1
CDC42BPBQ9Y5S2 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
CDC42BPBQ9Y5S2 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC28.16■■■□□ 2.1
CDC42BPBQ9Y5S2 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
CDC42BPBQ9Y5S2 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
CDC42BPBQ9Y5S2 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC28.16■■■□□ 2.1
CDC42BPBQ9Y5S2 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC28.16■■■□□ 2.1
CDC42BPBQ9Y5S2 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC28.16■■■□□ 2.1
CDC42BPBQ9Y5S2 PAM16-208ENST00000573553 722 ntTSL 2 BASIC28.16■■■□□ 2.1
CDC42BPBQ9Y5S2 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC28.16■■■□□ 2.1
CDC42BPBQ9Y5S2 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC28.15■■■□□ 2.1
CDC42BPBQ9Y5S2 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
CDC42BPBQ9Y5S2 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
CDC42BPBQ9Y5S2 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC28.15■■■□□ 2.1
CDC42BPBQ9Y5S2 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC28.15■■■□□ 2.1
CDC42BPBQ9Y5S2 KRT18P58-201ENST00000527480 1120 ntBASIC28.15■■■□□ 2.1
CDC42BPBQ9Y5S2 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC28.15■■■□□ 2.1
CDC42BPBQ9Y5S2 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
CDC42BPBQ9Y5S2 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC28.15■■■□□ 2.1
CDC42BPBQ9Y5S2 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC28.15■■■□□ 2.1
CDC42BPBQ9Y5S2 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
CDC42BPBQ9Y5S2 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
CDC42BPBQ9Y5S2 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC28.15■■■□□ 2.1
CDC42BPBQ9Y5S2 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
CDC42BPBQ9Y5S2 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
CDC42BPBQ9Y5S2 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
CDC42BPBQ9Y5S2 MINOS1P3-201ENST00000457048 203 ntBASIC28.15■■■□□ 2.1
CDC42BPBQ9Y5S2 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
CDC42BPBQ9Y5S2 AL049840.3-201ENST00000602669 611 ntBASIC28.15■■■□□ 2.1
CDC42BPBQ9Y5S2 AC114341.1-201ENST00000618070 349 ntBASIC28.15■■■□□ 2.1
CDC42BPBQ9Y5S2 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
CDC42BPBQ9Y5S2 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
CDC42BPBQ9Y5S2 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
CDC42BPBQ9Y5S2 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC28.14■■■□□ 2.1
CDC42BPBQ9Y5S2 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
CDC42BPBQ9Y5S2 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC28.14■■■□□ 2.1
CDC42BPBQ9Y5S2 KRT18P13-201ENST00000400056 1290 ntBASIC28.14■■■□□ 2.1
CDC42BPBQ9Y5S2 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC28.14■■■□□ 2.1
CDC42BPBQ9Y5S2 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC28.14■■■□□ 2.1
CDC42BPBQ9Y5S2 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC28.14■■■□□ 2.1
CDC42BPBQ9Y5S2 MOK-208ENST00000519058 917 ntTSL 2 BASIC28.14■■■□□ 2.1
CDC42BPBQ9Y5S2 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC28.14■■■□□ 2.1
CDC42BPBQ9Y5S2 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC28.14■■■□□ 2.1
CDC42BPBQ9Y5S2 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.09
CDC42BPBQ9Y5S2 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC28.14■■■□□ 2.09
CDC42BPBQ9Y5S2 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC28.14■■■□□ 2.09
CDC42BPBQ9Y5S2 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC28.14■■■□□ 2.09
CDC42BPBQ9Y5S2 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC28.14■■■□□ 2.09
CDC42BPBQ9Y5S2 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC28.14■■■□□ 2.09
CDC42BPBQ9Y5S2 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC28.13■■■□□ 2.09
CDC42BPBQ9Y5S2 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC28.13■■■□□ 2.09
CDC42BPBQ9Y5S2 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
CDC42BPBQ9Y5S2 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
CDC42BPBQ9Y5S2 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC28.13■■■□□ 2.09
CDC42BPBQ9Y5S2 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC28.13■■■□□ 2.09
CDC42BPBQ9Y5S2 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC28.13■■■□□ 2.09
CDC42BPBQ9Y5S2 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC28.13■■■□□ 2.09
CDC42BPBQ9Y5S2 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms