Protein–RNA interactions for Protein: Q9Y2I6

NINL, Ninein-like protein, humanhuman

Predictions only

Length 1,382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NINLQ9Y2I6 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
NINLQ9Y2I6 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC25.52■■□□□ 1.68
NINLQ9Y2I6 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC25.52■■□□□ 1.68
NINLQ9Y2I6 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
NINLQ9Y2I6 KRT89P-201ENST00000620027 1478 ntBASIC25.52■■□□□ 1.68
NINLQ9Y2I6 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
NINLQ9Y2I6 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC25.52■■□□□ 1.68
NINLQ9Y2I6 KRT8P26-201ENST00000534154 1276 ntBASIC25.52■■□□□ 1.68
NINLQ9Y2I6 CALM1-205ENST00000553542 877 ntTSL 5 BASIC25.52■■□□□ 1.68
NINLQ9Y2I6 TK1-205ENST00000590862 642 ntTSL 3 BASIC25.52■■□□□ 1.68
NINLQ9Y2I6 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC25.52■■□□□ 1.68
NINLQ9Y2I6 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC25.52■■□□□ 1.68
NINLQ9Y2I6 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC25.52■■□□□ 1.68
NINLQ9Y2I6 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
NINLQ9Y2I6 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC25.51■■□□□ 1.68
NINLQ9Y2I6 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC25.51■■□□□ 1.68
NINLQ9Y2I6 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC25.51■■□□□ 1.67
NINLQ9Y2I6 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC25.51■■□□□ 1.67
NINLQ9Y2I6 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
NINLQ9Y2I6 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC25.51■■□□□ 1.67
NINLQ9Y2I6 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
NINLQ9Y2I6 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC25.51■■□□□ 1.67
NINLQ9Y2I6 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC25.51■■□□□ 1.67
NINLQ9Y2I6 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC25.51■■□□□ 1.67
NINLQ9Y2I6 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
NINLQ9Y2I6 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC25.51■■□□□ 1.67
NINLQ9Y2I6 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC25.51■■□□□ 1.67
NINLQ9Y2I6 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
NINLQ9Y2I6 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC25.51■■□□□ 1.67
NINLQ9Y2I6 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC25.51■■□□□ 1.67
NINLQ9Y2I6 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC25.51■■□□□ 1.67
NINLQ9Y2I6 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC25.51■■□□□ 1.67
NINLQ9Y2I6 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC25.51■■□□□ 1.67
NINLQ9Y2I6 NAA38-203ENST00000575071 553 ntTSL 2 BASIC25.51■■□□□ 1.67
NINLQ9Y2I6 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC25.51■■□□□ 1.67
NINLQ9Y2I6 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
NINLQ9Y2I6 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
NINLQ9Y2I6 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
NINLQ9Y2I6 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC25.51■■□□□ 1.67
NINLQ9Y2I6 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
NINLQ9Y2I6 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
NINLQ9Y2I6 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC25.5■■□□□ 1.67
NINLQ9Y2I6 TSSC2-201ENST00000450217 709 ntBASIC25.5■■□□□ 1.67
NINLQ9Y2I6 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC25.5■■□□□ 1.67
NINLQ9Y2I6 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC25.5■■□□□ 1.67
NINLQ9Y2I6 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC25.5■■□□□ 1.67
NINLQ9Y2I6 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
NINLQ9Y2I6 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC25.49■■□□□ 1.67
NINLQ9Y2I6 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
NINLQ9Y2I6 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
NINLQ9Y2I6 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
NINLQ9Y2I6 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
NINLQ9Y2I6 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
NINLQ9Y2I6 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
NINLQ9Y2I6 BX276092.5-203ENST00000456199 560 ntBASIC25.49■■□□□ 1.67
NINLQ9Y2I6 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC25.49■■□□□ 1.67
NINLQ9Y2I6 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC25.49■■□□□ 1.67
NINLQ9Y2I6 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
NINLQ9Y2I6 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC25.49■■□□□ 1.67
NINLQ9Y2I6 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
NINLQ9Y2I6 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC25.49■■□□□ 1.67
NINLQ9Y2I6 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
NINLQ9Y2I6 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC25.49■■□□□ 1.67
NINLQ9Y2I6 AC016734.2-201ENST00000624325 1377 ntBASIC25.49■■□□□ 1.67
NINLQ9Y2I6 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC25.49■■□□□ 1.67
NINLQ9Y2I6 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC25.49■■□□□ 1.67
NINLQ9Y2I6 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC25.49■■□□□ 1.67
NINLQ9Y2I6 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
NINLQ9Y2I6 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC25.48■■□□□ 1.67
NINLQ9Y2I6 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC25.48■■□□□ 1.67
NINLQ9Y2I6 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
NINLQ9Y2I6 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC25.48■■□□□ 1.67
NINLQ9Y2I6 AL390719.2-201ENST00000606993 987 ntBASIC25.48■■□□□ 1.67
NINLQ9Y2I6 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC25.48■■□□□ 1.67
NINLQ9Y2I6 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC25.48■■□□□ 1.67
NINLQ9Y2I6 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC25.48■■□□□ 1.67
NINLQ9Y2I6 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
NINLQ9Y2I6 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC25.48■■□□□ 1.67
NINLQ9Y2I6 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC25.47■■□□□ 1.67
NINLQ9Y2I6 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC25.47■■□□□ 1.67
NINLQ9Y2I6 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
NINLQ9Y2I6 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
NINLQ9Y2I6 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC25.47■■□□□ 1.67
NINLQ9Y2I6 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC25.47■■□□□ 1.67
NINLQ9Y2I6 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
NINLQ9Y2I6 CHCHD2P8-201ENST00000429873 447 ntBASIC25.47■■□□□ 1.67
NINLQ9Y2I6 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
NINLQ9Y2I6 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC25.47■■□□□ 1.67
NINLQ9Y2I6 REEP1-209ENST00000541910 969 ntTSL 2 BASIC25.47■■□□□ 1.67
NINLQ9Y2I6 RNF126P1-202ENST00000569893 925 ntBASIC25.47■■□□□ 1.67
NINLQ9Y2I6 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC25.47■■□□□ 1.67
NINLQ9Y2I6 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC25.47■■□□□ 1.67
NINLQ9Y2I6 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC25.47■■□□□ 1.67
NINLQ9Y2I6 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
NINLQ9Y2I6 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC25.47■■□□□ 1.67
NINLQ9Y2I6 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC25.47■■□□□ 1.67
NINLQ9Y2I6 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
NINLQ9Y2I6 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC25.47■■□□□ 1.67
NINLQ9Y2I6 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC25.47■■□□□ 1.67
NINLQ9Y2I6 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC25.46■■□□□ 1.67
Retrieved 100 of 98,524 protein–RNA pairs in 74.4 ms