Protein–RNA interactions for Protein: Q9UN74

PCDHA4, Protocadherin alpha-4, humanhuman

Predictions only

Length 947 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4Q9UN74 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
PCDHA4Q9UN74 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC21.32■■□□□ 1
PCDHA4Q9UN74 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC21.32■■□□□ 1
PCDHA4Q9UN74 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC21.32■■□□□ 1
PCDHA4Q9UN74 MYC-208ENST00000641036 567 ntBASIC21.32■■□□□ 1
PCDHA4Q9UN74 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC21.32■■□□□ 1
PCDHA4Q9UN74 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
PCDHA4Q9UN74 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
PCDHA4Q9UN74 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC21.32■■□□□ 1
PCDHA4Q9UN74 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC21.32■■□□□ 1
PCDHA4Q9UN74 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
PCDHA4Q9UN74 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
PCDHA4Q9UN74 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC21.32■■□□□ 1
PCDHA4Q9UN74 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
PCDHA4Q9UN74 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC21.32■■□□□ 1
PCDHA4Q9UN74 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC21.32■■□□□ 1
PCDHA4Q9UN74 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC21.31■■□□□ 1
PCDHA4Q9UN74 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PCDHA4Q9UN74 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PCDHA4Q9UN74 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC21.31■■□□□ 1
PCDHA4Q9UN74 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PCDHA4Q9UN74 KRT8P50-201ENST00000562022 1438 ntBASIC21.31■■□□□ 1
PCDHA4Q9UN74 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC21.31■■□□□ 1
PCDHA4Q9UN74 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC21.31■■□□□ 1
PCDHA4Q9UN74 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PCDHA4Q9UN74 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC21.31■■□□□ 1
PCDHA4Q9UN74 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC21.31■■□□□ 1
PCDHA4Q9UN74 AL020996.1-203ENST00000536896 2307 ntBASIC21.31■■□□□ 1
PCDHA4Q9UN74 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC21.31■■□□□ 1
PCDHA4Q9UN74 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC21.31■■□□□ 1
PCDHA4Q9UN74 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC21.31■■□□□ 1
PCDHA4Q9UN74 CD70-202ENST00000423145 881 ntTSL 2 BASIC21.31■■□□□ 1
PCDHA4Q9UN74 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC21.31■■□□□ 1
PCDHA4Q9UN74 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
PCDHA4Q9UN74 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC21.31■■□□□ 1
PCDHA4Q9UN74 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC21.31■■□□□ 1
PCDHA4Q9UN74 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
PCDHA4Q9UN74 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC21.31■■□□□ 1
PCDHA4Q9UN74 AC112497.1-201ENST00000624824 639 ntBASIC21.31■■□□□ 1
PCDHA4Q9UN74 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
PCDHA4Q9UN74 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
PCDHA4Q9UN74 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PCDHA4Q9UN74 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
PCDHA4Q9UN74 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC21.31■■□□□ 1
PCDHA4Q9UN74 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC21.31■■□□□ 1
PCDHA4Q9UN74 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PCDHA4Q9UN74 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC21.31■■□□□ 1
PCDHA4Q9UN74 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
PCDHA4Q9UN74 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC21.3■■□□□ 1
PCDHA4Q9UN74 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
PCDHA4Q9UN74 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
PCDHA4Q9UN74 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
PCDHA4Q9UN74 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
PCDHA4Q9UN74 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
PCDHA4Q9UN74 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC21.3■■□□□ 1
PCDHA4Q9UN74 AP000593.1-201ENST00000393668 712 ntBASIC21.3■■□□□ 1
PCDHA4Q9UN74 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
PCDHA4Q9UN74 CFL2-205ENST00000555765 632 ntTSL 2 BASIC21.3■■□□□ 1
PCDHA4Q9UN74 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC21.3■■□□□ 1
PCDHA4Q9UN74 TK2-213ENST00000563369 882 ntTSL 5 BASIC21.3■■□□□ 1
PCDHA4Q9UN74 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC21.3■■□□□ 1
PCDHA4Q9UN74 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
PCDHA4Q9UN74 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC21.3■■□□□ 1
PCDHA4Q9UN74 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC21.3■■□□□ 1
PCDHA4Q9UN74 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
PCDHA4Q9UN74 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC21.3■■□□□ 1
PCDHA4Q9UN74 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
PCDHA4Q9UN74 CYP51A1P1-201ENST00000492267 1507 ntBASIC21.29■■□□□ 1
PCDHA4Q9UN74 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC21.29■■□□□ 1
PCDHA4Q9UN74 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC21.29■■□□□ 1
PCDHA4Q9UN74 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC21.29■■□□□ 1
PCDHA4Q9UN74 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC21.29■■□□□ 1
PCDHA4Q9UN74 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC21.29■■□□□ 1
PCDHA4Q9UN74 AC126763.1-201ENST00000552015 2118 ntBASIC21.29■■□□□ 1
PCDHA4Q9UN74 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
PCDHA4Q9UN74 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC21.29■■□□□ 1
PCDHA4Q9UN74 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC21.29■■□□□ 1
PCDHA4Q9UN74 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC21.29■■□□□ 1
PCDHA4Q9UN74 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PCDHA4Q9UN74 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC21.29■■□□□ 1
PCDHA4Q9UN74 MYLKP1-201ENST00000509077 1580 ntBASIC21.29■■□□□ 1
PCDHA4Q9UN74 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC21.29■■□□□ 1
PCDHA4Q9UN74 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PCDHA4Q9UN74 GAD2-202ENST00000376248 680 ntTSL 5 BASIC21.29■■□□□ 1
PCDHA4Q9UN74 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC21.29■■□□□ 1
PCDHA4Q9UN74 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC21.29■■□□□ 1
PCDHA4Q9UN74 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC21.29■■□□□ 1
PCDHA4Q9UN74 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC21.29■■□□□ 1
PCDHA4Q9UN74 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC21.29■■□□□ 1
PCDHA4Q9UN74 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
PCDHA4Q9UN74 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC21.29■■□□□ 1
PCDHA4Q9UN74 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC21.29■■□□□ 1
PCDHA4Q9UN74 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC21.29■■□□□ 1
PCDHA4Q9UN74 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC21.29■■□□□ 1
PCDHA4Q9UN74 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
PCDHA4Q9UN74 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PCDHA4Q9UN74 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC21.29■■□□□ 1
PCDHA4Q9UN74 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC21.29■■□□□ 1
PCDHA4Q9UN74 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC21.29■■□□□ 1
PCDHA4Q9UN74 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC21.29■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms