Protein–RNA interactions for Protein: Q9UBB6

NCDN, Neurochondrin, humanhuman

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCDNQ9UBB6 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
NCDNQ9UBB6 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC18.5■□□□□ 0.55
NCDNQ9UBB6 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC18.5■□□□□ 0.55
NCDNQ9UBB6 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
NCDNQ9UBB6 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
NCDNQ9UBB6 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
NCDNQ9UBB6 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
NCDNQ9UBB6 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
NCDNQ9UBB6 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
NCDNQ9UBB6 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC18.5■□□□□ 0.55
NCDNQ9UBB6 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC18.5■□□□□ 0.55
NCDNQ9UBB6 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC18.5■□□□□ 0.55
NCDNQ9UBB6 PGAM5P1-201ENST00000518923 814 ntBASIC18.5■□□□□ 0.55
NCDNQ9UBB6 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC18.5■□□□□ 0.55
NCDNQ9UBB6 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC18.5■□□□□ 0.55
NCDNQ9UBB6 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC18.5■□□□□ 0.55
NCDNQ9UBB6 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
NCDNQ9UBB6 GPR32P1-201ENST00000601788 811 ntBASIC18.5■□□□□ 0.55
NCDNQ9UBB6 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
NCDNQ9UBB6 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
NCDNQ9UBB6 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
NCDNQ9UBB6 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC18.5■□□□□ 0.55
NCDNQ9UBB6 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
NCDNQ9UBB6 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
NCDNQ9UBB6 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC18.5■□□□□ 0.55
NCDNQ9UBB6 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
NCDNQ9UBB6 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
NCDNQ9UBB6 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC18.49■□□□□ 0.55
NCDNQ9UBB6 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC18.49■□□□□ 0.55
NCDNQ9UBB6 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
NCDNQ9UBB6 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
NCDNQ9UBB6 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC18.49■□□□□ 0.55
NCDNQ9UBB6 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC18.49■□□□□ 0.55
NCDNQ9UBB6 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
NCDNQ9UBB6 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
NCDNQ9UBB6 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC18.49■□□□□ 0.55
NCDNQ9UBB6 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC18.49■□□□□ 0.55
NCDNQ9UBB6 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC18.49■□□□□ 0.55
NCDNQ9UBB6 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC18.49■□□□□ 0.55
NCDNQ9UBB6 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC18.49■□□□□ 0.55
NCDNQ9UBB6 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC18.49■□□□□ 0.55
NCDNQ9UBB6 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
NCDNQ9UBB6 PRKN-208ENST00000610470 531 ntTSL 2 BASIC18.49■□□□□ 0.55
NCDNQ9UBB6 PRKN-209ENST00000612485 225 ntTSL 5 BASIC18.49■□□□□ 0.55
NCDNQ9UBB6 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
NCDNQ9UBB6 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC18.49■□□□□ 0.55
NCDNQ9UBB6 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
NCDNQ9UBB6 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC18.49■□□□□ 0.55
NCDNQ9UBB6 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC18.49■□□□□ 0.55
NCDNQ9UBB6 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
NCDNQ9UBB6 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
NCDNQ9UBB6 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
NCDNQ9UBB6 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC18.49■□□□□ 0.55
NCDNQ9UBB6 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
NCDNQ9UBB6 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
NCDNQ9UBB6 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
NCDNQ9UBB6 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
NCDNQ9UBB6 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
NCDNQ9UBB6 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC18.48■□□□□ 0.55
NCDNQ9UBB6 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
NCDNQ9UBB6 MOK-225ENST00000522867 1883 ntTSL 5 BASIC18.48■□□□□ 0.55
NCDNQ9UBB6 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
NCDNQ9UBB6 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
NCDNQ9UBB6 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
NCDNQ9UBB6 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC18.48■□□□□ 0.55
NCDNQ9UBB6 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC18.48■□□□□ 0.55
NCDNQ9UBB6 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
NCDNQ9UBB6 HES2-202ENST00000377836 507 ntTSL 2 BASIC18.48■□□□□ 0.55
NCDNQ9UBB6 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
NCDNQ9UBB6 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC18.48■□□□□ 0.55
NCDNQ9UBB6 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
NCDNQ9UBB6 UPF3AP3-201ENST00000420996 769 ntBASIC18.48■□□□□ 0.55
NCDNQ9UBB6 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
NCDNQ9UBB6 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC18.48■□□□□ 0.55
NCDNQ9UBB6 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
NCDNQ9UBB6 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
NCDNQ9UBB6 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
NCDNQ9UBB6 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC18.48■□□□□ 0.55
NCDNQ9UBB6 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC18.48■□□□□ 0.55
NCDNQ9UBB6 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC18.48■□□□□ 0.55
NCDNQ9UBB6 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
NCDNQ9UBB6 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
NCDNQ9UBB6 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
NCDNQ9UBB6 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
NCDNQ9UBB6 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
NCDNQ9UBB6 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
NCDNQ9UBB6 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
NCDNQ9UBB6 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
NCDNQ9UBB6 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
NCDNQ9UBB6 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
NCDNQ9UBB6 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC18.47■□□□□ 0.55
NCDNQ9UBB6 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC18.47■□□□□ 0.55
NCDNQ9UBB6 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
NCDNQ9UBB6 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC18.47■□□□□ 0.55
NCDNQ9UBB6 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC18.47■□□□□ 0.55
NCDNQ9UBB6 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
NCDNQ9UBB6 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC18.47■□□□□ 0.55
NCDNQ9UBB6 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC18.47■□□□□ 0.55
NCDNQ9UBB6 AC010327.4-202ENST00000591484 748 ntBASIC18.47■□□□□ 0.55
NCDNQ9UBB6 AP001160.2-201ENST00000596071 487 ntBASIC18.47■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 170.1 ms