Protein–RNA interactions for Protein: Q9NWF4

SLC52A1, Solute carrier family 52, riboflavin transporter, member 1, humanhuman

Predictions only

Length 448 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A1Q9NWF4 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC26.71■■□□□ 1.87
SLC52A1Q9NWF4 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
SLC52A1Q9NWF4 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
SLC52A1Q9NWF4 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.87
SLC52A1Q9NWF4 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC26.7■■□□□ 1.87
SLC52A1Q9NWF4 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC26.7■■□□□ 1.87
SLC52A1Q9NWF4 AC141586.3-201ENST00000562166 1838 ntBASIC26.7■■□□□ 1.87
SLC52A1Q9NWF4 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
SLC52A1Q9NWF4 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
SLC52A1Q9NWF4 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
SLC52A1Q9NWF4 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC26.7■■□□□ 1.86
SLC52A1Q9NWF4 RPP21-221ENST00000428040 594 ntTSL 2 BASIC26.7■■□□□ 1.86
SLC52A1Q9NWF4 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC26.7■■□□□ 1.86
SLC52A1Q9NWF4 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC26.7■■□□□ 1.86
SLC52A1Q9NWF4 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
SLC52A1Q9NWF4 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC26.7■■□□□ 1.86
SLC52A1Q9NWF4 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC26.7■■□□□ 1.86
SLC52A1Q9NWF4 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC26.7■■□□□ 1.86
SLC52A1Q9NWF4 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC26.7■■□□□ 1.86
SLC52A1Q9NWF4 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC26.7■■□□□ 1.86
SLC52A1Q9NWF4 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
SLC52A1Q9NWF4 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC26.7■■□□□ 1.86
SLC52A1Q9NWF4 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC26.7■■□□□ 1.86
SLC52A1Q9NWF4 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
SLC52A1Q9NWF4 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
SLC52A1Q9NWF4 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC26.69■■□□□ 1.86
SLC52A1Q9NWF4 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC26.69■■□□□ 1.86
SLC52A1Q9NWF4 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC26.69■■□□□ 1.86
SLC52A1Q9NWF4 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
SLC52A1Q9NWF4 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC26.69■■□□□ 1.86
SLC52A1Q9NWF4 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC26.69■■□□□ 1.86
SLC52A1Q9NWF4 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC26.69■■□□□ 1.86
SLC52A1Q9NWF4 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
SLC52A1Q9NWF4 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
SLC52A1Q9NWF4 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC26.69■■□□□ 1.86
SLC52A1Q9NWF4 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC26.68■■□□□ 1.86
SLC52A1Q9NWF4 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
SLC52A1Q9NWF4 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC26.68■■□□□ 1.86
SLC52A1Q9NWF4 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC26.68■■□□□ 1.86
SLC52A1Q9NWF4 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC26.68■■□□□ 1.86
SLC52A1Q9NWF4 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC26.68■■□□□ 1.86
SLC52A1Q9NWF4 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC26.68■■□□□ 1.86
SLC52A1Q9NWF4 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
SLC52A1Q9NWF4 AC018712.1-201ENST00000455767 687 ntBASIC26.68■■□□□ 1.86
SLC52A1Q9NWF4 AF186996.4-201ENST00000467186 377 ntBASIC26.68■■□□□ 1.86
SLC52A1Q9NWF4 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC26.68■■□□□ 1.86
SLC52A1Q9NWF4 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC26.68■■□□□ 1.86
SLC52A1Q9NWF4 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC26.68■■□□□ 1.86
SLC52A1Q9NWF4 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC26.68■■□□□ 1.86
SLC52A1Q9NWF4 AC125437.2-201ENST00000625180 2167 ntBASIC26.68■■□□□ 1.86
SLC52A1Q9NWF4 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC26.67■■□□□ 1.86
SLC52A1Q9NWF4 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
SLC52A1Q9NWF4 AL357033.4-201ENST00000617703 1807 ntBASIC26.67■■□□□ 1.86
SLC52A1Q9NWF4 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC26.67■■□□□ 1.86
SLC52A1Q9NWF4 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
SLC52A1Q9NWF4 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
SLC52A1Q9NWF4 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC26.67■■□□□ 1.86
SLC52A1Q9NWF4 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC26.67■■□□□ 1.86
SLC52A1Q9NWF4 KRT18P13-201ENST00000400056 1290 ntBASIC26.67■■□□□ 1.86
SLC52A1Q9NWF4 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC26.67■■□□□ 1.86
SLC52A1Q9NWF4 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC26.67■■□□□ 1.86
SLC52A1Q9NWF4 RNPS1P1-201ENST00000507437 918 ntBASIC26.67■■□□□ 1.86
SLC52A1Q9NWF4 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC26.67■■□□□ 1.86
SLC52A1Q9NWF4 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC26.67■■□□□ 1.86
SLC52A1Q9NWF4 IRF8-202ENST00000562492 946 ntTSL 3 BASIC26.67■■□□□ 1.86
SLC52A1Q9NWF4 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC26.67■■□□□ 1.86
SLC52A1Q9NWF4 AC148477.8-201ENST00000624298 468 ntBASIC26.67■■□□□ 1.86
SLC52A1Q9NWF4 ANKRD20A8P-203ENST00000641373 517 ntBASIC26.67■■□□□ 1.86
SLC52A1Q9NWF4 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC26.67■■□□□ 1.86
SLC52A1Q9NWF4 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC26.67■■□□□ 1.86
SLC52A1Q9NWF4 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC26.67■■□□□ 1.86
SLC52A1Q9NWF4 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
SLC52A1Q9NWF4 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
SLC52A1Q9NWF4 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC26.66■■□□□ 1.86
SLC52A1Q9NWF4 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
SLC52A1Q9NWF4 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC26.66■■□□□ 1.86
SLC52A1Q9NWF4 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC26.66■■□□□ 1.86
SLC52A1Q9NWF4 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC26.66■■□□□ 1.86
SLC52A1Q9NWF4 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC26.66■■□□□ 1.86
SLC52A1Q9NWF4 AC113404.2-201ENST00000507884 177 ntBASIC26.66■■□□□ 1.86
SLC52A1Q9NWF4 KRT18P58-201ENST00000527480 1120 ntBASIC26.66■■□□□ 1.86
SLC52A1Q9NWF4 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC26.66■■□□□ 1.86
SLC52A1Q9NWF4 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC26.66■■□□□ 1.86
SLC52A1Q9NWF4 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC26.66■■□□□ 1.86
SLC52A1Q9NWF4 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC26.66■■□□□ 1.86
SLC52A1Q9NWF4 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC26.66■■□□□ 1.86
SLC52A1Q9NWF4 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
SLC52A1Q9NWF4 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
SLC52A1Q9NWF4 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC26.66■■□□□ 1.86
SLC52A1Q9NWF4 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC26.66■■□□□ 1.86
SLC52A1Q9NWF4 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
SLC52A1Q9NWF4 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC26.66■■□□□ 1.86
SLC52A1Q9NWF4 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
SLC52A1Q9NWF4 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
SLC52A1Q9NWF4 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
SLC52A1Q9NWF4 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
SLC52A1Q9NWF4 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC26.65■■□□□ 1.86
SLC52A1Q9NWF4 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC26.65■■□□□ 1.86
SLC52A1Q9NWF4 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
SLC52A1Q9NWF4 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC26.65■■□□□ 1.86
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms