Protein–RNA interactions for Protein: Q9H6T3

RPAP3, RNA polymerase II-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP3Q9H6T3 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
RPAP3Q9H6T3 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
RPAP3Q9H6T3 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
RPAP3Q9H6T3 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC21.49■■□□□ 1.03
RPAP3Q9H6T3 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
RPAP3Q9H6T3 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC21.49■■□□□ 1.03
RPAP3Q9H6T3 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
RPAP3Q9H6T3 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
RPAP3Q9H6T3 AL032819.2-201ENST00000624543 2162 ntBASIC21.49■■□□□ 1.03
RPAP3Q9H6T3 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC21.49■■□□□ 1.03
RPAP3Q9H6T3 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
RPAP3Q9H6T3 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
RPAP3Q9H6T3 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC21.49■■□□□ 1.03
RPAP3Q9H6T3 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC21.49■■□□□ 1.03
RPAP3Q9H6T3 KLK8-205ENST00000593490 267 ntTSL 3 BASIC21.49■■□□□ 1.03
RPAP3Q9H6T3 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC21.49■■□□□ 1.03
RPAP3Q9H6T3 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC21.49■■□□□ 1.03
RPAP3Q9H6T3 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC21.49■■□□□ 1.03
RPAP3Q9H6T3 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC21.49■■□□□ 1.03
RPAP3Q9H6T3 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC21.49■■□□□ 1.03
RPAP3Q9H6T3 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
RPAP3Q9H6T3 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
RPAP3Q9H6T3 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
RPAP3Q9H6T3 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
RPAP3Q9H6T3 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
RPAP3Q9H6T3 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC21.48■■□□□ 1.03
RPAP3Q9H6T3 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
RPAP3Q9H6T3 AFG3L1P-217ENST00000557444 2447 ntBASIC21.48■■□□□ 1.03
RPAP3Q9H6T3 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC21.48■■□□□ 1.03
RPAP3Q9H6T3 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
RPAP3Q9H6T3 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
RPAP3Q9H6T3 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
RPAP3Q9H6T3 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC21.48■■□□□ 1.03
RPAP3Q9H6T3 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC21.48■■□□□ 1.03
RPAP3Q9H6T3 TSPY19P-201ENST00000418461 509 ntBASIC21.48■■□□□ 1.03
RPAP3Q9H6T3 TSPY18P-201ENST00000441642 509 ntBASIC21.48■■□□□ 1.03
RPAP3Q9H6T3 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC21.48■■□□□ 1.03
RPAP3Q9H6T3 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC21.48■■□□□ 1.03
RPAP3Q9H6T3 AC012615.1-201ENST00000565797 1299 ntBASIC21.48■■□□□ 1.03
RPAP3Q9H6T3 AC090616.6-201ENST00000582640 721 ntBASIC21.48■■□□□ 1.03
RPAP3Q9H6T3 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC21.48■■□□□ 1.03
RPAP3Q9H6T3 GPR32P1-201ENST00000601788 811 ntBASIC21.48■■□□□ 1.03
RPAP3Q9H6T3 IGHV3-41-201ENST00000613121 348 ntBASIC21.48■■□□□ 1.03
RPAP3Q9H6T3 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
RPAP3Q9H6T3 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
RPAP3Q9H6T3 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
RPAP3Q9H6T3 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
RPAP3Q9H6T3 Z98044.1-201ENST00000632503 1764 ntBASIC21.48■■□□□ 1.03
RPAP3Q9H6T3 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
RPAP3Q9H6T3 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
RPAP3Q9H6T3 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
RPAP3Q9H6T3 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC21.48■■□□□ 1.03
RPAP3Q9H6T3 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
RPAP3Q9H6T3 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC21.48■■□□□ 1.03
RPAP3Q9H6T3 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
RPAP3Q9H6T3 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
RPAP3Q9H6T3 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC21.47■■□□□ 1.03
RPAP3Q9H6T3 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
RPAP3Q9H6T3 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC21.47■■□□□ 1.03
RPAP3Q9H6T3 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC21.47■■□□□ 1.03
RPAP3Q9H6T3 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
RPAP3Q9H6T3 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
RPAP3Q9H6T3 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC21.47■■□□□ 1.03
RPAP3Q9H6T3 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC21.47■■□□□ 1.03
RPAP3Q9H6T3 FOSL1P1-201ENST00000511041 816 ntBASIC21.47■■□□□ 1.03
RPAP3Q9H6T3 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
RPAP3Q9H6T3 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC21.47■■□□□ 1.03
RPAP3Q9H6T3 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC21.47■■□□□ 1.03
RPAP3Q9H6T3 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
RPAP3Q9H6T3 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC21.47■■□□□ 1.03
RPAP3Q9H6T3 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
RPAP3Q9H6T3 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
RPAP3Q9H6T3 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
RPAP3Q9H6T3 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
RPAP3Q9H6T3 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
RPAP3Q9H6T3 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
RPAP3Q9H6T3 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
RPAP3Q9H6T3 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC21.46■■□□□ 1.03
RPAP3Q9H6T3 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
RPAP3Q9H6T3 AL357033.4-201ENST00000617703 1807 ntBASIC21.46■■□□□ 1.03
RPAP3Q9H6T3 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
RPAP3Q9H6T3 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
RPAP3Q9H6T3 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
RPAP3Q9H6T3 IGHGP-201ENST00000390555 1178 ntBASIC21.46■■□□□ 1.03
RPAP3Q9H6T3 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
RPAP3Q9H6T3 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
RPAP3Q9H6T3 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC21.46■■□□□ 1.03
RPAP3Q9H6T3 REEP1-209ENST00000541910 969 ntTSL 2 BASIC21.46■■□□□ 1.03
RPAP3Q9H6T3 TEN1-204ENST00000588202 862 ntTSL 3 BASIC21.46■■□□□ 1.03
RPAP3Q9H6T3 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
RPAP3Q9H6T3 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
RPAP3Q9H6T3 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC21.46■■□□□ 1.03
RPAP3Q9H6T3 AC007952.6-201ENST00000573168 2673 ntBASIC21.46■■□□□ 1.03
RPAP3Q9H6T3 AC003957.1-201ENST00000625108 2673 ntBASIC21.46■■□□□ 1.03
RPAP3Q9H6T3 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
RPAP3Q9H6T3 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
RPAP3Q9H6T3 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
RPAP3Q9H6T3 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC21.46■■□□□ 1.03
RPAP3Q9H6T3 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
RPAP3Q9H6T3 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms