Protein–RNA interactions for Protein: Q9H422

HIPK3, Homeodomain-interacting protein kinase 3, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3Q9H422 KRT18P13-201ENST00000400056 1290 ntBASIC20.4■□□□□ 0.86
HIPK3Q9H422 IL9RP2-201ENST00000423948 1312 ntBASIC20.4■□□□□ 0.86
HIPK3Q9H422 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC20.4■□□□□ 0.86
HIPK3Q9H422 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
HIPK3Q9H422 PPOX-214ENST00000535223 664 ntTSL 3 BASIC20.4■□□□□ 0.86
HIPK3Q9H422 AP005901.3-202ENST00000581653 237 ntBASIC20.4■□□□□ 0.86
HIPK3Q9H422 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC20.4■□□□□ 0.86
HIPK3Q9H422 AC024563.2-201ENST00000603282 481 ntBASIC20.4■□□□□ 0.86
HIPK3Q9H422 IGHV3OR16-7-201ENST00000604106 360 ntBASIC20.4■□□□□ 0.86
HIPK3Q9H422 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
HIPK3Q9H422 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC20.4■□□□□ 0.86
HIPK3Q9H422 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC20.4■□□□□ 0.86
HIPK3Q9H422 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC20.39■□□□□ 0.86
HIPK3Q9H422 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC20.39■□□□□ 0.86
HIPK3Q9H422 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC20.39■□□□□ 0.86
HIPK3Q9H422 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.86
HIPK3Q9H422 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
HIPK3Q9H422 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
HIPK3Q9H422 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
HIPK3Q9H422 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC20.39■□□□□ 0.86
HIPK3Q9H422 AC034236.2-201ENST00000606662 1610 ntBASIC20.39■□□□□ 0.86
HIPK3Q9H422 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
HIPK3Q9H422 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
HIPK3Q9H422 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC20.39■□□□□ 0.85
HIPK3Q9H422 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC20.39■□□□□ 0.85
HIPK3Q9H422 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
HIPK3Q9H422 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
HIPK3Q9H422 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
HIPK3Q9H422 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
HIPK3Q9H422 RNA5SP419-201ENST00000515908 135 ntBASIC20.39■□□□□ 0.85
HIPK3Q9H422 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
HIPK3Q9H422 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
HIPK3Q9H422 AL773604.1-201ENST00000617417 272 ntBASIC20.39■□□□□ 0.85
HIPK3Q9H422 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
HIPK3Q9H422 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
HIPK3Q9H422 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC20.39■□□□□ 0.85
HIPK3Q9H422 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
HIPK3Q9H422 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
HIPK3Q9H422 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
HIPK3Q9H422 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
HIPK3Q9H422 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC20.38■□□□□ 0.85
HIPK3Q9H422 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
HIPK3Q9H422 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
HIPK3Q9H422 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
HIPK3Q9H422 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC20.38■□□□□ 0.85
HIPK3Q9H422 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
HIPK3Q9H422 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
HIPK3Q9H422 AC006333.2-201ENST00000607957 2099 ntBASIC20.38■□□□□ 0.85
HIPK3Q9H422 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
HIPK3Q9H422 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
HIPK3Q9H422 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC20.38■□□□□ 0.85
HIPK3Q9H422 MINOS1P3-201ENST00000457048 203 ntBASIC20.38■□□□□ 0.85
HIPK3Q9H422 CDV3-207ENST00000508481 661 ntTSL 3 BASIC20.38■□□□□ 0.85
HIPK3Q9H422 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC20.38■□□□□ 0.85
HIPK3Q9H422 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC20.38■□□□□ 0.85
HIPK3Q9H422 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
HIPK3Q9H422 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC20.38■□□□□ 0.85
HIPK3Q9H422 TP73-202ENST00000354437 2140 ntTSL 5 BASIC20.38■□□□□ 0.85
HIPK3Q9H422 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
HIPK3Q9H422 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC20.37■□□□□ 0.85
HIPK3Q9H422 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC20.37■□□□□ 0.85
HIPK3Q9H422 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
HIPK3Q9H422 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
HIPK3Q9H422 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC20.37■□□□□ 0.85
HIPK3Q9H422 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC20.37■□□□□ 0.85
HIPK3Q9H422 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
HIPK3Q9H422 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.37■□□□□ 0.85
HIPK3Q9H422 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
HIPK3Q9H422 TLE1-202ENST00000376484 666 ntTSL 3 BASIC20.37■□□□□ 0.85
HIPK3Q9H422 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
HIPK3Q9H422 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
HIPK3Q9H422 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC20.37■□□□□ 0.85
HIPK3Q9H422 AC091607.1-201ENST00000490318 1060 ntBASIC20.37■□□□□ 0.85
HIPK3Q9H422 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
HIPK3Q9H422 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC20.37■□□□□ 0.85
HIPK3Q9H422 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
HIPK3Q9H422 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC20.37■□□□□ 0.85
HIPK3Q9H422 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
HIPK3Q9H422 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
HIPK3Q9H422 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
HIPK3Q9H422 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC20.37■□□□□ 0.85
HIPK3Q9H422 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC20.37■□□□□ 0.85
HIPK3Q9H422 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC20.37■□□□□ 0.85
HIPK3Q9H422 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
HIPK3Q9H422 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
HIPK3Q9H422 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
HIPK3Q9H422 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
HIPK3Q9H422 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
HIPK3Q9H422 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
HIPK3Q9H422 AL353692.3-201ENST00000407031 1396 ntBASIC20.36■□□□□ 0.85
HIPK3Q9H422 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
HIPK3Q9H422 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
HIPK3Q9H422 TEX21P-204ENST00000641479 1693 ntBASIC20.36■□□□□ 0.85
HIPK3Q9H422 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
HIPK3Q9H422 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC20.36■□□□□ 0.85
HIPK3Q9H422 FAM197Y8-203ENST00000450145 560 ntBASIC20.36■□□□□ 0.85
HIPK3Q9H422 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC20.36■□□□□ 0.85
HIPK3Q9H422 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC20.36■□□□□ 0.85
HIPK3Q9H422 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC20.36■□□□□ 0.85
HIPK3Q9H422 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC20.36■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms