Protein–RNA interactions for Protein: Q9H2X0

CHRD, Chordin, humanhuman

Predictions only

Length 955 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDQ9H2X0 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
CHRDQ9H2X0 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
CHRDQ9H2X0 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CHRDQ9H2X0 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
CHRDQ9H2X0 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
CHRDQ9H2X0 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
CHRDQ9H2X0 KRT8P32-201ENST00000512863 1461 ntBASIC18.71■□□□□ 0.59
CHRDQ9H2X0 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
CHRDQ9H2X0 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CHRDQ9H2X0 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CHRDQ9H2X0 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC18.7■□□□□ 0.58
CHRDQ9H2X0 AC006333.2-201ENST00000607957 2099 ntBASIC18.7■□□□□ 0.58
CHRDQ9H2X0 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CHRDQ9H2X0 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CHRDQ9H2X0 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CHRDQ9H2X0 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
CHRDQ9H2X0 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CHRDQ9H2X0 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
CHRDQ9H2X0 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CHRDQ9H2X0 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC18.7■□□□□ 0.58
CHRDQ9H2X0 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CHRDQ9H2X0 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CHRDQ9H2X0 REEP1-209ENST00000541910 969 ntTSL 2 BASIC18.7■□□□□ 0.58
CHRDQ9H2X0 NAT14-202ENST00000587400 416 ntTSL 5 BASIC18.7■□□□□ 0.58
CHRDQ9H2X0 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC18.7■□□□□ 0.58
CHRDQ9H2X0 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CHRDQ9H2X0 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
CHRDQ9H2X0 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CHRDQ9H2X0 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CHRDQ9H2X0 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CHRDQ9H2X0 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
CHRDQ9H2X0 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC18.7■□□□□ 0.58
CHRDQ9H2X0 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CHRDQ9H2X0 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CHRDQ9H2X0 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CHRDQ9H2X0 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CHRDQ9H2X0 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CHRDQ9H2X0 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
CHRDQ9H2X0 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
CHRDQ9H2X0 Z82202.1-201ENST00000623446 1880 ntBASIC18.69■□□□□ 0.58
CHRDQ9H2X0 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CHRDQ9H2X0 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CHRDQ9H2X0 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC18.69■□□□□ 0.58
CHRDQ9H2X0 MIR1233-2-201ENST00000408138 82 ntBASIC18.69■□□□□ 0.58
CHRDQ9H2X0 MIR1233-1-201ENST00000408722 82 ntBASIC18.69■□□□□ 0.58
CHRDQ9H2X0 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CHRDQ9H2X0 AC093909.1-201ENST00000504731 1122 ntBASIC18.69■□□□□ 0.58
CHRDQ9H2X0 IRF8-202ENST00000562492 946 ntTSL 3 BASIC18.69■□□□□ 0.58
CHRDQ9H2X0 AC106730.1-201ENST00000566722 1090 ntBASIC18.69■□□□□ 0.58
CHRDQ9H2X0 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC18.69■□□□□ 0.58
CHRDQ9H2X0 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC18.69■□□□□ 0.58
CHRDQ9H2X0 AL591684.3-201ENST00000605187 298 ntBASIC18.69■□□□□ 0.58
CHRDQ9H2X0 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC18.69■□□□□ 0.58
CHRDQ9H2X0 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
CHRDQ9H2X0 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
CHRDQ9H2X0 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC18.69■□□□□ 0.58
CHRDQ9H2X0 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CHRDQ9H2X0 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
CHRDQ9H2X0 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CHRDQ9H2X0 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC18.69■□□□□ 0.58
CHRDQ9H2X0 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CHRDQ9H2X0 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CHRDQ9H2X0 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CHRDQ9H2X0 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC18.68■□□□□ 0.58
CHRDQ9H2X0 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CHRDQ9H2X0 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC18.68■□□□□ 0.58
CHRDQ9H2X0 AC092865.5-201ENST00000545435 363 ntBASIC18.68■□□□□ 0.58
CHRDQ9H2X0 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC18.68■□□□□ 0.58
CHRDQ9H2X0 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CHRDQ9H2X0 AC009065.1-201ENST00000564055 1225 ntBASIC18.68■□□□□ 0.58
CHRDQ9H2X0 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC18.68■□□□□ 0.58
CHRDQ9H2X0 BNIP3P18-201ENST00000593976 575 ntBASIC18.68■□□□□ 0.58
CHRDQ9H2X0 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC18.68■□□□□ 0.58
CHRDQ9H2X0 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC18.68■□□□□ 0.58
CHRDQ9H2X0 TEX21P-204ENST00000641479 1693 ntBASIC18.68■□□□□ 0.58
CHRDQ9H2X0 LBX2-AS1-202ENST00000603175 2083 ntBASIC18.68■□□□□ 0.58
CHRDQ9H2X0 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CHRDQ9H2X0 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CHRDQ9H2X0 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CHRDQ9H2X0 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CHRDQ9H2X0 CYP51A1P1-201ENST00000492267 1507 ntBASIC18.68■□□□□ 0.58
CHRDQ9H2X0 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CHRDQ9H2X0 SLC25A24-204ENST00000569674 2357 ntBASIC18.68■□□□□ 0.58
CHRDQ9H2X0 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CHRDQ9H2X0 EFS-203ENST00000429593 2610 ntTSL 2 BASIC18.68■□□□□ 0.58
CHRDQ9H2X0 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CHRDQ9H2X0 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CHRDQ9H2X0 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC18.68■□□□□ 0.58
CHRDQ9H2X0 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CHRDQ9H2X0 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC18.67■□□□□ 0.58
CHRDQ9H2X0 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC18.67■□□□□ 0.58
CHRDQ9H2X0 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CHRDQ9H2X0 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC18.67■□□□□ 0.58
CHRDQ9H2X0 TP73-202ENST00000354437 2140 ntTSL 5 BASIC18.67■□□□□ 0.58
CHRDQ9H2X0 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CHRDQ9H2X0 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC18.67■□□□□ 0.58
CHRDQ9H2X0 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CHRDQ9H2X0 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC18.67■□□□□ 0.58
CHRDQ9H2X0 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CHRDQ9H2X0 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms