Protein–RNA interactions for Protein: Q96T58

SPEN, Msx2-interacting protein, humanhuman

Known RBP Predictions only

Length 3,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPENQ96T58 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC16.83■□□□□ 0.29
SPENQ96T58 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC16.83■□□□□ 0.29
SPENQ96T58 AC010240.3-201ENST00000607688 395 ntBASIC16.83■□□□□ 0.29
SPENQ96T58 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC16.83■□□□□ 0.29
SPENQ96T58 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
SPENQ96T58 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
SPENQ96T58 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC16.83■□□□□ 0.29
SPENQ96T58 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC16.83■□□□□ 0.28
SPENQ96T58 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
SPENQ96T58 MIR1233-2-201ENST00000408138 82 ntBASIC16.83■□□□□ 0.28
SPENQ96T58 MIR1233-1-201ENST00000408722 82 ntBASIC16.83■□□□□ 0.28
SPENQ96T58 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
SPENQ96T58 AC106730.1-201ENST00000566722 1090 ntBASIC16.83■□□□□ 0.28
SPENQ96T58 LINC01521-201ENST00000504184 1943 ntBASIC16.83■□□□□ 0.28
SPENQ96T58 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
SPENQ96T58 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC16.83■□□□□ 0.28
SPENQ96T58 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SPENQ96T58 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SPENQ96T58 POLD2P1-201ENST00000511220 997 ntBASIC16.83■□□□□ 0.28
SPENQ96T58 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
SPENQ96T58 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC16.83■□□□□ 0.28
SPENQ96T58 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC16.83■□□□□ 0.28
SPENQ96T58 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SPENQ96T58 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SPENQ96T58 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SPENQ96T58 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
SPENQ96T58 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SPENQ96T58 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SPENQ96T58 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC16.82■□□□□ 0.28
SPENQ96T58 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SPENQ96T58 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC16.82■□□□□ 0.28
SPENQ96T58 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SPENQ96T58 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
SPENQ96T58 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SPENQ96T58 AC018712.1-201ENST00000455767 687 ntBASIC16.82■□□□□ 0.28
SPENQ96T58 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SPENQ96T58 MOK-208ENST00000519058 917 ntTSL 2 BASIC16.82■□□□□ 0.28
SPENQ96T58 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC16.82■□□□□ 0.28
SPENQ96T58 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC16.82■□□□□ 0.28
SPENQ96T58 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
SPENQ96T58 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SPENQ96T58 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC16.82■□□□□ 0.28
SPENQ96T58 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
SPENQ96T58 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
SPENQ96T58 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
SPENQ96T58 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SPENQ96T58 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SPENQ96T58 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
SPENQ96T58 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
SPENQ96T58 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SPENQ96T58 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC16.81■□□□□ 0.28
SPENQ96T58 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC16.81■□□□□ 0.28
SPENQ96T58 AL499627.1-201ENST00000569373 2188 ntBASIC16.81■□□□□ 0.28
SPENQ96T58 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SPENQ96T58 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SPENQ96T58 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC16.81■□□□□ 0.28
SPENQ96T58 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC16.81■□□□□ 0.28
SPENQ96T58 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC16.81■□□□□ 0.28
SPENQ96T58 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC16.81■□□□□ 0.28
SPENQ96T58 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC16.81■□□□□ 0.28
SPENQ96T58 AL049840.3-201ENST00000602669 611 ntBASIC16.81■□□□□ 0.28
SPENQ96T58 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
SPENQ96T58 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC16.81■□□□□ 0.28
SPENQ96T58 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
SPENQ96T58 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC16.81■□□□□ 0.28
SPENQ96T58 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SPENQ96T58 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SPENQ96T58 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SPENQ96T58 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC16.81■□□□□ 0.28
SPENQ96T58 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
SPENQ96T58 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
SPENQ96T58 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SPENQ96T58 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC16.81■□□□□ 0.28
SPENQ96T58 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC16.81■□□□□ 0.28
SPENQ96T58 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SPENQ96T58 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC16.81■□□□□ 0.28
SPENQ96T58 LINC02084-201ENST00000606069 1096 ntBASIC16.81■□□□□ 0.28
SPENQ96T58 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SPENQ96T58 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC16.81■□□□□ 0.28
SPENQ96T58 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
SPENQ96T58 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SPENQ96T58 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
SPENQ96T58 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC16.81■□□□□ 0.28
SPENQ96T58 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SPENQ96T58 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC16.8■□□□□ 0.28
SPENQ96T58 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
SPENQ96T58 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
SPENQ96T58 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SPENQ96T58 KRT18P23-201ENST00000435622 1283 ntBASIC16.8■□□□□ 0.28
SPENQ96T58 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
SPENQ96T58 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
SPENQ96T58 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
SPENQ96T58 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC16.8■□□□□ 0.28
SPENQ96T58 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
SPENQ96T58 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC16.8■□□□□ 0.28
SPENQ96T58 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC16.8■□□□□ 0.28
SPENQ96T58 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC16.8■□□□□ 0.28
SPENQ96T58 NAA38-203ENST00000575071 553 ntTSL 2 BASIC16.8■□□□□ 0.28
SPENQ96T58 AC112497.1-201ENST00000624824 639 ntBASIC16.8■□□□□ 0.28
SPENQ96T58 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms